Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56251.1
DDBJ : putative sulfate ABC transporter permease
Swiss-Prot:
Homologs Archaea 36/68 : Bacteria 625/915 : Eukaryota 5/199 : Viruses 0/175 --->[See Alignment]
f.58.1
:268 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB 76->261 3d31C PDBj 3e-17 29.8 %
:RPS:PDB 159->198 3dhwA PDBj 1e-10 27.5 %
:RPS:SCOP 34->264 2r6gG1 f.58.1.1 * 2e-16 17.3 %
:RPS:PFM 137->256 PF00528 * BPD_transp_1 3e-08 36.2 %
:HMM:PFM 70->265 PF00528 * BPD_transp_1 2.9e-22 21.8 179/185
:HMM:PFM 20->53 PF12354 * Internalin_N 9e-05 35.3 34/57
:BLT:SWISS 33->264 CYSW_SYNE7 5e-49 43.3 %
:TM
:SEG
SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56251.1
GT:GENE BAD56251.1
GT:PRODUCT putative sulfate ABC transporter permease
GT:DATABASE GIB00210CH01
GT:ORG nfar0
GB:ACCESSION GIB00210CH01
GB:LOCATION 1581414..1582220
GB:FROM 1581414
GB:TO 1582220
GB:DIRECTION +
GB:PRODUCT putative sulfate ABC transporter permease
GB:PROTEIN_ID BAD56251.1
LENGTH 268
SQ:AASEQ MRLSPLTRLSLRTVALGYLFVLLVLPLIVILWRTFENGIGAFVDSITTPAAISAFQLSLLIVAIVVPVNVVFGVITALALVRGRFPGRTLVQGIVDLPFAVSPVVVGVALILLWGAGGWLGGVENLGFKVIFSLPGMVIATIFVTLPFVVREVEPVLHEIGDDQEQAAATLGASRWQTFWRITLPAIRWGLTYGIVLTVARSLGEFGAVIMVSSALPGKSQTLTLLVHGRYINDHNTFGAYCAATLLMGIALVTLLLMTVLERKRDAT
GT:EXON 1|1-268:0|
BL:SWS:NREP 1
BL:SWS:REP 33->264|CYSW_SYNE7|5e-49|43.3|231/286|
TM:NTM 6
TM:REGION 11->33|
TM:REGION 49->71|
TM:REGION 92->114|
TM:REGION 127->149|
TM:REGION 193->215|
TM:REGION 239->261|
SEG 2->31|rlspltrlslrtvalgylfvllvlplivil|
SEG 61->75|ivaivvpvnvvfgvi|
SEG 104->127|vvvgvalillwgaggwlggvenlg|
BL:PDB:NREP 1
BL:PDB:REP 76->261|3d31C|3e-17|29.8|178/248|
RP:PDB:NREP 1
RP:PDB:REP 159->198|3dhwA|1e-10|27.5|40/203|
RP:PFM:NREP 1
RP:PFM:REP 137->256|PF00528|3e-08|36.2|116/195|BPD_transp_1|
HM:PFM:NREP 2
HM:PFM:REP 70->265|PF00528|2.9e-22|21.8|179/185|BPD_transp_1|
HM:PFM:REP 20->53|PF12354|9e-05|35.3|34/57|Internalin_N|
GO:PFM:NREP 3
GO:PFM GO:0005215|"GO:transporter activity"|PF00528|IPR000515|
GO:PFM GO:0006810|"GO:transport"|PF00528|IPR000515|
GO:PFM GO:0016020|"GO:membrane"|PF00528|IPR000515|
RP:SCP:NREP 1
RP:SCP:REP 34->264|2r6gG1|2e-16|17.3|225/284|f.58.1.1|
OP:NHOMO 1518
OP:NHOMOORG 666
OP:PATTERN ---1-1-----------------1-12111111-12125555312133-1532-1111311------- -11-2111---2--33333-33--33333333333332331-1-1111311-1111-111112-1111111--------11-211111----1------------1-1-----------------1212212422211122--13213333333344------33233331-------------1111---3-11111133111113114211111131223--111111135-11111111111111111111----------11-----------------------11111111111-------------------------1-322211211121233---13-21112331442121-111---1--21--3333-----334353333556544444444444-44233243123-455333332333551---15476513-22222222-33-2423-------------------------------11--144232222222122222222222223324333-1333322334343325581333331222222222333-2323212113111-43113336-31333212312111111-1-111111111221111333231--1-114444111444516115112---11-------33332333333333333-3333333333333223323333553333333333333333333333323332-33333333333322-1---------4121533331311111111133323233334533333333544443333---------11111333331113111333333332222--11222222-------------------------------------11-------13- -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------222-----12-------------- -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
STR:NPRED 180
STR:RPRED 67.2
SQ:SECSTR ###########################################################################HHHHHTTcccTTHHHHHHHHHGGGTccHHHHHHHHHHHHcTTcTTTGGGTTTcccTTcHHHHHHHHHHHHHHHHHHHHHHHHHHccTTTTTHHHHHTccTHHHHHHTTHHHHHHHHHHHHHHHHHHHHTccHHHHHH#HcTTccHHH###HHHHHHHHH##HcTTTTTHHHHHHHHHHHHHHHHHH#######
DISOP:02AL 265-268|
PSIPRED ccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc
//
[GTOP]
