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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56255.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  23/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.55.1
:697 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   69->263 1dkgD PDBj 6e-10 30.6 %
:RPS:PDB   91->263 3d2eA PDBj 1e-16 20.3 %
:RPS:SCOP  1->133 1jceA1  c.55.1.1 * 3e-08 17.5 %
:RPS:SCOP  148->263 1e4fT2  c.55.1.1 * 1e-04 13.2 %
:HMM:SCOP  67->142 1dkgD1 c.55.1.1 * 7.8e-09 34.2 %
:HMM:SCOP  140->287 1mwmA2 c.55.1.1 * 2.5e-16 33.1 %
:RPS:PFM   69->263 PF00012 * HSP70 3e-12 34.7 %
:HMM:PFM   77->165 PF00012 * HSP70 8.1e-09 36.9 84/602  
:HMM:PFM   216->292 PF00012 * HSP70 2.9e-09 31.6 76/602  
:BLT:SWISS 72->264 DNAK_MYCMM 3e-13 35.4 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56255.1 GT:GENE BAD56255.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 1586571..1588664 GB:FROM 1586571 GB:TO 1588664 GB:DIRECTION + GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD56255.1 LENGTH 697 SQ:AASEQ MGFSIGAVNSVSAAVTTTRPRPSIRVRRTALTFDDAGAAVGVGGVPRVDSAVTDFADLARDPEPLLLGGRLYTAPGLVATVLRELIGGTEAVAGAVLTYPAVYSDKQVALLRQALDLSGAREVMLVPEPVAAAEWLAHEHGPLESGFVLVYDLGATSLDVTVVRVGPDWPDHPIVGNPRRCYDFGGRPLGTMLARYSRGAATGSVSLTSLVDVDGLRAEHVRDSFEVVRAAVRSTGRSLSDIDRVLVVGGAARPPEVAATLAELGRPVVTAADPAHITAAGAAHFAARVFAPELGESHSARGVVFSGAAVASAIAVSAATVLGGNAEPVLAPVLQRFPELPVPLEALPHASYTGAVVDHGVRHGVPLGLTQPVAGLTRTPHGRYVATATDRPAGPTIAESRRGAHSDPRTERYPALYADPAHFTNPLPFGWATLDSEWERPTPSSPAPGTNTPPAQPGSGPAPGQPATGPAQGTPVSDPGVPAPGGAQPSAPAAGGSVPAGTEAAPGTDAAPGTGADGTAGTNTGGDQPGSGAASDGGGAEGAPGSDGAGSGGASGGTTDGSGGASSGGESSGGASGGGSGAADSGGSDGGSAGAGSGGSGGASSGAGGGSGGGTSAGGSGGSGGESSGGTSGDRDGSGASSSGTSSKGSDSGGAGSGGGSKSGGGKGGGKGGGGKSDGGSRSGGGNGGSGGGSGDR GT:EXON 1|1-697:0| BL:SWS:NREP 1 BL:SWS:REP 72->264|DNAK_MYCMM|3e-13|35.4|192/622| SEG 36->45|agaavgvggv| SEG 269->292|vtaadpahitaagaahfaarvfap| SEG 299->319|sargvvfsgaavasaiavsaa| SEG 452->475|tppaqpgsgpapgqpatgpaqgtp| SEG 479->527|pgvpapggaqpsapaaggsvpagteaapgtdaapgtgadgtagtntggd| SEG 530->696|gsgaasdgggaegapgsdgagsggasggttdgsggassggessggasgggsgaadsggsdggsagagsggsggassgagggsgggtsaggsggsggessggtsgdrdgsgasssgtsskgsdsggagsgggsksgggkgggkggggksdggsrsgggnggsgggsgd| BL:PDB:NREP 1 BL:PDB:REP 69->263|1dkgD|6e-10|30.6|193/376| RP:PDB:NREP 1 RP:PDB:REP 91->263|3d2eA|1e-16|20.3|172/622| RP:PFM:NREP 1 RP:PFM:REP 69->263|PF00012|3e-12|34.7|193/488|HSP70| HM:PFM:NREP 2 HM:PFM:REP 77->165|PF00012|8.1e-09|36.9|84/602|HSP70| HM:PFM:REP 216->292|PF00012|2.9e-09|31.6|76/602|HSP70| RP:SCP:NREP 2 RP:SCP:REP 1->133|1jceA1|3e-08|17.5|126/137|c.55.1.1| RP:SCP:REP 148->263|1e4fT2|1e-04|13.2|114/185|c.55.1.1| HM:SCP:REP 67->142|1dkgD1|7.8e-09|34.2|76/0|c.55.1.1|1/1|Actin-like ATPase domain| HM:SCP:REP 140->287|1mwmA2|2.5e-16|33.1|142/0|c.55.1.1|1/1|Actin-like ATPase domain| OP:NHOMO 27 OP:NHOMOORG 23 OP:PATTERN -------------------------------------------------------------------- ------------------------------------2132-1----------1--------1----1---------------------------------------------------------------------------------1------------------------------------------1-----------------------------------------------------------------------------------------------------------------------------------------------------------------1-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1----------------------------------------1--11111-------------1---------------------------------1-----------------1---------1-----------------------------------------------------------------------------------------------------------------------------------1----------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 222 STR:RPRED 31.9 SQ:SECSTR ##############################################ccHHHHHHHHHHHHHHccTTEEEEEEEHHHHHHHHHHHHHHHHHcccEEEEEEcTTccHHHHHHHHHHHHHTTcEEEEEEEHHHHHHHHHHHHccccccccEEEEEEccccEEEEEEEETTEEEEEEEEEETTccHHHHHHHHHHHHHHHHHccEEEEEEEEEETTEEEEEHHHHHHTTHHHHHHHHHHTccGGGccEEEEEcGGGGcHHHHHHHHHHcccE############################################################################################################################################################################################################################################################################################################################################################################################################################################# DISOP:02AL 285-308, 310-697| PSIPRED cccccccccEEEEEEEcccEEEcccccccEEEEcccccEEHHHHHHHHHHHHHHHHHHccccEEEEEccEEEcHHHHHHHHHHHHHHHHHHHHccEEEEcccccHHHHHHHHHHHHHccccEEEEcccHHHHHHHHHHHcccccccEEEEEEccccEEEEEEEEEccccHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHcccEEEEccccHHHHHHHHHHHHcccccccccccccEEccccccHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc //