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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56256.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  50/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.23.10
:232 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   35->226 3dc7A PDBj 3e-15 20.3 %
:RPS:SCOP  35->230 1yzfA1  c.23.10.5 * 6e-20 20.7 %
:HMM:SCOP  29->226 1vjgA_ c.23.10.6 * 1e-35 32.3 %
:RPS:PFM   39->140 PF00657 * Lipase_GDSL 2e-05 36.0 %
:HMM:PFM   36->216 PF00657 * Lipase_GDSL 7.8e-20 26.7 180/235  
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56256.1 GT:GENE BAD56256.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(1588765..1589463) GB:FROM 1588765 GB:TO 1589463 GB:DIRECTION - GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD56256.1 LENGTH 232 SQ:AASEQ MSENTIGSHTEADDPMLLDPGAAGALLRGAPWRRYAVLGDSIAQGIGDPTPGYRAVGWAERVADALRAVVPGLAYLNTGRMGATSAQVREDQLPRVLEFAPDLVHVICGGNDMFATEPDLDGLRDNLDAMFTALRATGAQLCTFTVADVWEVERMADMRPMRERMTAMNAVIRDVAADHDALLVDFWRHPLRLRPDLMSADLIHFGTGGHAVVATEIIRALGTLVPVNRAAG GT:EXON 1|1-232:0| SEG 15->34|pmlldpgaagallrgapwrr| SEG 174->185|dvaadhdallvd| RP:PDB:NREP 1 RP:PDB:REP 35->226|3dc7A|3e-15|20.3|182/207| RP:PFM:NREP 1 RP:PFM:REP 39->140|PF00657|2e-05|36.0|100/201|Lipase_GDSL| HM:PFM:NREP 1 HM:PFM:REP 36->216|PF00657|7.8e-20|26.7|180/235|Lipase_GDSL| GO:PFM:NREP 2 GO:PFM GO:0006629|"GO:lipid metabolic process"|PF00657|IPR001087| GO:PFM GO:0016788|"GO:hydrolase activity, acting on ester bonds"|PF00657|IPR001087| RP:SCP:NREP 1 RP:SCP:REP 35->230|1yzfA1|6e-20|20.7|188/195|c.23.10.5| HM:SCP:REP 29->226|1vjgA_|1e-35|32.3|189/0|c.23.10.6|1/1|SGNH hydrolase| OP:NHOMO 75 OP:NHOMOORG 50 OP:PATTERN -------------------------------------------------------------------- ----2----------1------11-1------112121----31----1112545112--221-1222113---------------------------------------------------------------------------------------------------------------------------11111111-111111------111------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 192 STR:RPRED 82.8 SQ:SECSTR ##################################EEEEEcTTTcTTccccccHHHHcHHHHHHHHHHHHHTccccEEEEcTTccccTTcccHHHGGGcTTccEEEEEccHHHHHTTcccHccTTcccTcHHHHHHHHHHHEEEcccccccccTTccccccTTcccHHHHHHHHHHTccEEEHHHHcccTTcHHHHHHHccccccccHHHHHHHHHHHHHHHHHHcG###### DISOP:02AL 1-8, 229-232| PSIPRED ccccccccccccccccccccccccccccccccEEEEEEEccHHccccccccccccccHHHHHHHHHHHHcccEEEEEccccHHHHHHHHHHHHHHHHHccccEEEEEEcccHHccccccHHHHHHHHHHHHHHHHHccccEEEEEcccccccccccHHHHHHHHHHHHHHHHHHHHHHcccEEEEccHHHHccccHHHccccccccHHHHHHHHHHHHHHHHHHcccccccc //