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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56257.1
DDBJ      :             putative transporter
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  18/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
f.38.1
:470 amino acids
:PSIPRED
:DISOPRED
:HMM:SCOP  1->470 1pw4A_ f.38.1.1 * 3.3e-64 30.8 %
:HMM:PFM   24->361 PF07690 * MFS_1 9.2e-38 31.9 276/353  
:HMM:PFM   319->463 PF07690 * MFS_1 1.2e-09 30.6 134/353  
:BLT:SWISS 28->234 MMR_STRCO 1e-12 32.5 %
:PROS 73->89|PS00216|SUGAR_TRANSPORT_1
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56257.1 GT:GENE BAD56257.1 GT:PRODUCT putative transporter GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(1589460..1590872) GB:FROM 1589460 GB:TO 1590872 GB:DIRECTION - GB:PRODUCT putative transporter GB:PROTEIN_ID BAD56257.1 LENGTH 470 SQ:AASEQ MTTVSQRTQRPPNLARRTLLIACGATFIALLDLSVVNIAFPSLARDYPDTPVTTLTWVVSGYGVAFAALLTPAGRFADALGRRRLFLIALAAFALTSLLCGLAPDAATLIAGRVAQGAAAALMMPAALGLILAVTPRERIGAAIGAWSAAGSFAAVVGPPLGGALVEAFGWRAVFVVNVPIALALMLPARGLPETGLRPPGSGLPDPVGTIAVALGLGGLVVGVTEGQRWGWTAPTTLLALGVGAALVAVAIARSARLTVTGRAAGAALAVGLWRSRPYALANAASFVFAGAMYSWLMAGPLFLDAVWGYSVLGSAGAMTAGALTSMITATAAGRITAPAVRRWAGVLGALLFAAAALWMSSDSFGPDPALWTAWIPAGVLGGGGIGLVLTALGTAAAAALPPEQFAAGIGMNLTARQVGGALGVAVMAAVLAAHPGDALTGLHTHFAVCAAIAALTAVLTALPSRQEQP GT:EXON 1|1-470:0| BL:SWS:NREP 1 BL:SWS:REP 28->234|MMR_STRCO|1e-12|32.5|203/475| PROS 73->89|PS00216|SUGAR_TRANSPORT_1|PDOC00190| TM:NTM 14 TM:REGION 19->41| TM:REGION 51->73| TM:REGION 85->107| TM:REGION 116->137| TM:REGION 142->164| TM:REGION 171->193| TM:REGION 205->226| TM:REGION 234->256| TM:REGION 282->304| TM:REGION 311->333| TM:REGION 344->366| TM:REGION 375->397| TM:REGION 417->439| TM:REGION 444->465| SEG 79->99|algrrrlflialaafaltsll| SEG 109->133|liagrvaqgaaaalmmpaalglila| SEG 140->158|igaaigawsaagsfaavvg| SEG 208->225|vgtiavalglgglvvgvt| SEG 238->273|llalgvgaalvavaiarsarltvtgraagaalavgl| SEG 345->358|agvlgallfaaaal| SEG 376->402|ipagvlggggiglvltalgtaaaaalp| SEG 419->434|vggalgvavmaavlaa| SEG 448->463|avcaaiaaltavltal| HM:PFM:NREP 2 HM:PFM:REP 24->361|PF07690|9.2e-38|31.9|276/353|MFS_1| HM:PFM:REP 319->463|PF07690|1.2e-09|30.6|134/353|MFS_1| HM:SCP:REP 1->470|1pw4A_|3.3e-64|30.8|400/447|f.38.1.1|1/1|MFS general substrate transporter| OP:NHOMO 18 OP:NHOMOORG 18 OP:PATTERN -------------------------------------------------------------------- ----1-------------------1------1----111-1--1-----11-----------------1---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---------------------------------------------------------------------------------1111--------------------------------------------------------------------------------------------------------------1---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-15, 467-470| PSIPRED cccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccc //