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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56258.1
DDBJ      :             putative transcriptional regulator
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  71/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.121.1a.4.1
:202 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   32->184 2hyjA PDBj 2e-24 41.2 %
:RPS:PDB   34->201 3br3B PDBj 5e-13 8.5 %
:RPS:SCOP  89->201 2hyjA2  a.121.1.1 * 2e-14 38.1 %
:HMM:SCOP  7->95 1t33A1 a.4.1.9 * 5.7e-11 25.0 %
:HMM:SCOP  89->201 2g3bA2 a.121.1.1 * 3.5e-16 35.5 %
:HMM:PFM   26->68 PF00440 * TetR_N 1.2e-07 30.2 43/47  
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56258.1 GT:GENE BAD56258.1 GT:PRODUCT putative transcriptional regulator GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 1590970..1591578 GB:FROM 1590970 GB:TO 1591578 GB:DIRECTION + GB:PRODUCT putative transcriptional regulator GB:PROTEIN_ID BAD56258.1 LENGTH 202 SQ:AASEQ MGLMAEPITDQRLVKGARSRAAIARHAADVASVEGLDGLSIGRLATDLGVSKSGIATLFGSKQALQLAAVRAAREVFIERIVEPAVREPRGLPRVRALVTRWLDYITDPVFPGGCFRAATLAEFDSRPGPVRDALVADHAEWMALLEKQLRHAVDRDELPGRDPAALAFELDALVTAANTARQLGDETKLATARAIIDRLLT GT:EXON 1|1-202:0| SEG 17->31|arsraaiarhaadva| SEG 63->76|qalqlaavraarev| BL:PDB:NREP 1 BL:PDB:REP 32->184|2hyjA|2e-24|41.2|153/193| RP:PDB:NREP 1 RP:PDB:REP 34->201|3br3B|5e-13|8.5|165/183| HM:PFM:NREP 1 HM:PFM:REP 26->68|PF00440|1.2e-07|30.2|43/47|TetR_N| RP:SCP:NREP 1 RP:SCP:REP 89->201|2hyjA2|2e-14|38.1|113/118|a.121.1.1| HM:SCP:REP 7->95|1t33A1|5.7e-11|25.0|88/0|a.4.1.9|1/1|Homeodomain-like| HM:SCP:REP 89->201|2g3bA2|3.5e-16|35.5|110/0|a.121.1.1|1/1|Tetracyclin repressor-like, C-terminal domain| OP:NHOMO 82 OP:NHOMOORG 71 OP:PATTERN -------------------------------------------------------------------- ----1------------11-1---------------1--1-1---1----------------1----111--------------------------------------------------------------------------1-1-------------------1--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-------------------------------------------11--------------------------------------1-------------------------------------222-1111111111111111111111112222--22111111112121----------------------------------------------1111-1-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------11----------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 171 STR:RPRED 84.7 SQ:SECSTR ###############################HHHHHHHccHHHHHHHTTccHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHGGGcccHHHHHHHHHHHHHHccccGTTcGGHHHHHHHHHHTTccHHHHHHHHHHHHHHHHHHHHHHHHHHHTTccccccHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHH DISOP:02AL 1-20| PSIPRED cccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHcccccHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHcc //