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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56259.1
DDBJ      :             putative monovalent cation/proton antiporter
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  122/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
:536 amino acids
:PSIPRED
:DISOPRED
:RPS:PFM   47->154 PF00999 * Na_H_Exchanger 1e-05 29.6 %
:HMM:PFM   10->335 PF00999 * Na_H_Exchanger 3.5e-39 27.0 311/383  
:HMM:PFM   388->448 PF00999 * Na_H_Exchanger 1.3e-09 33.3 60/383  
:BLT:SWISS 9->154 YJCE_ECOLI 1e-10 37.7 %
:BLT:SWISS 392->467 CVRA_PSEAE 4e-06 38.7 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56259.1 GT:GENE BAD56259.1 GT:PRODUCT putative monovalent cation/proton antiporter GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 1591684..1593294 GB:FROM 1591684 GB:TO 1593294 GB:DIRECTION + GB:PRODUCT putative monovalent cation/proton antiporter GB:PROTEIN_ID BAD56259.1 LENGTH 536 SQ:AASEQ MAELLIGGVVMLIVIAGAATVGPKLGVAAPLILVAVGIVGSVVPFVPEVEIDPEWVLEGLLPPLLYSSAVAMPTMNFRRDFGAIGGLSVVLVVLTAVTLGVFFAWAIPGLSLAWGIALGAVISPTDAVATSIIRQAPVPRRVVAILDGESLLNDATALVLLRTAIAATAAAFSFGAAVGTFAWSVLVAVVVGGVVGWANLAVRHRVADATVNTVISFTVPFVASVPTELLGGSGLVAAVVAGIVTGYRAPRMLSARHRLSDSQNWRTIEVVLEGIVFLTMGLHLSGIVAEVHREHAGIGSALLVAVGALVLGLLVRAGYVGLLLAALAHRARRSVALQPRIRQFGERLARRVAEGEPAGRSIPERRVRRAGSRVRRALADIDYFLAQPLGPREGFVVVWAGMRGAITVAAAQTLPADTPNRPLLIFVAFAVATLSLLCQGATVGPLVRRLLGPARPGDDLRDERASVLELLRTVSAGVPRDPSASPKQHRLAVLSAQRAAILDARDDGAFDAEVLQAALSNIDAAQIALEMRGGPV GT:EXON 1|1-536:0| BL:SWS:NREP 2 BL:SWS:REP 9->154|YJCE_ECOLI|1e-10|37.7|146/549| BL:SWS:REP 392->467|CVRA_PSEAE|4e-06|38.7|75/580| TM:NTM 7 TM:REGION 1->22| TM:REGION 30->52| TM:REGION 91->113| TM:REGION 174->196| TM:REGION 217->239| TM:REGION 268->290| TM:REGION 302->324| SEG 82->101|gaigglsvvlvvltavtlgv| SEG 155->182|atalvllrtaiaataaafsfgaavgtfa| SEG 185->202|vlvavvvggvvgwanlav| SEG 229->242|llggsglvaavvag| SEG 296->337|agigsallvavgalvlgllvragyvglllaalahrarrsval| SEG 365->377|rrvrragsrvrra| RP:PFM:NREP 1 RP:PFM:REP 47->154|PF00999|1e-05|29.6|108/379|Na_H_Exchanger| HM:PFM:NREP 2 HM:PFM:REP 10->335|PF00999|3.5e-39|27.0|311/383|Na_H_Exchanger| HM:PFM:REP 388->448|PF00999|1.3e-09|33.3|60/383|Na_H_Exchanger| GO:PFM:NREP 4 GO:PFM GO:0006812|"GO:cation transport"|PF00999|IPR006153| GO:PFM GO:0015299|"GO:solute:hydrogen antiporter activity"|PF00999|IPR006153| GO:PFM GO:0016021|"GO:integral to membrane"|PF00999|IPR006153| GO:PFM GO:0055085|"GO:transmembrane transport"|PF00999|IPR006153| OP:NHOMO 132 OP:NHOMOORG 122 OP:PATTERN -------------------------------------------------------------------- ----1---------1----------1-------1111211-----11--111---1-1----1-1-1----------------------------------1---1-1----------------------------------------------------------------------------------------------------------------------------1-111111---111111111--------------------------1------------------------------------------------------------1---------------------------------------------1-1--1-------------------------------111-11-121---------------------------1-1-------------------------------------------12222111111112-1111-1311-1----------------1--------------------------------------------------------11----------------------11--------------------------------------------------11-1111111-111111111111111111111111--------------------1111111----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 453-467, 533-536| PSIPRED cHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHccHHHHHHHHHcccccHHHHHHHHHHHHccHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHcccccccccEEEEEEccHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHcccHHHHHHHHHHHHHccccccccccccEEEHHHHHHHHHHHHHHHcccccHHHHHHHHHHccHHHHHHHHccccc //