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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56278.1
DDBJ      :             hypothetical protein
Swiss-Prot:Y1433_NOCFA  RecName: Full=Putative metalloprotease NFA_14330;         EC=3.4.24.-;

Homologs  Archaea  0/68 : Bacteria  162/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
d.92.1
:184 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   36->128 1oz9A PDBj 4e-09 39.3 %
:RPS:SCOP  13->148 1oz9A  d.92.1.15 * 3e-27 31.0 %
:HMM:SCOP  1->150 1oz9A_ d.92.1.15 * 1.7e-40 40.0 %
:RPS:PFM   35->145 PF02130 * UPF0054 1e-10 41.1 %
:HMM:PFM   30->147 PF02130 * UPF0054 6.2e-42 48.2 114/145  
:BLT:SWISS 1->184 Y1433_NOCFA 3e-83 100.0 %
:PROS 118->128|PS01306|UPF0054
:COIL
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56278.1 GT:GENE BAD56278.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 1610205..1610759 GB:FROM 1610205 GB:TO 1610759 GB:DIRECTION + GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD56278.1 LENGTH 184 SQ:AASEQ MSIEIANESGIDVPEEDLVSVARFVIGRMDVHPAAELSMVLVDLDTMADLHMRWMDLPGPTDVMSFPMDELEPGGRPDSPEPGPSMLGDIVLCPEFAADQAHKAGHSLEHELALLTVHGVLHLLGYDHAEPEEEKEMFALQARLLEEWYESLREARRRAELAERDARLLGKAGFTAPGDALGPA GT:EXON 1|1-184:0| SW:ID Y1433_NOCFA SW:DE RecName: Full=Putative metalloprotease NFA_14330; EC=3.4.24.-; SW:GN OrderedLocusNames=NFA_14330; SW:KW Complete proteome; Hydrolase; Metal-binding; Metalloprotease;Protease; Zinc. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->184|Y1433_NOCFA|3e-83|100.0|184/184| GO:SWS:NREP 4 GO:SWS GO:0016787|"GO:hydrolase activity"|Hydrolase| GO:SWS GO:0046872|"GO:metal ion binding"|Metal-binding| GO:SWS GO:0008237|"GO:metallopeptidase activity"|Metalloprotease| GO:SWS GO:0008233|"GO:peptidase activity"|Protease| PROS 118->128|PS01306|UPF0054|PDOC01010| COIL:NAA 23 COIL:NSEG 1 COIL:REGION 145->167| SEG 112->125|lalltvhgvlhllg| SEG 150->169|eslrearrraelaerdarll| BL:PDB:NREP 1 BL:PDB:REP 36->128|1oz9A|4e-09|39.3|84/141| RP:PFM:NREP 1 RP:PFM:REP 35->145|PF02130|1e-10|41.1|107/142|UPF0054| HM:PFM:NREP 1 HM:PFM:REP 30->147|PF02130|6.2e-42|48.2|114/145|UPF0054| GO:PFM:NREP 2 GO:PFM GO:0008237|"GO:metallopeptidase activity"|PF02130|IPR002036| GO:PFM GO:0008270|"GO:zinc ion binding"|PF02130|IPR002036| RP:SCP:NREP 1 RP:SCP:REP 13->148|1oz9A|3e-27|31.0|126/141|d.92.1.15| HM:SCP:REP 1->150|1oz9A_|1.7e-40|40.0|140/141|d.92.1.15|1/1|Metalloproteases ("zincins"), catalytic domain| OP:NHOMO 163 OP:NHOMOORG 163 OP:PATTERN -------------------------------------------------------------------- ---1111111111111111-1111111111111111111111111111111111111111111111111111111111-11------------------------------------------------------------------------------1-------------------------------111111111111111111----1-1111--11--11111111-111111111111111111111-1--1--1---11--1-1---111--1-111------------------------------111---1---------------1---1-----11-11-1------11---------------------------1-------------------------------1---------1-------------------------------------------------------------------------------------------------------------------------------------------1------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 139 STR:RPRED 75.5 SQ:SECSTR EEEEEccccccccccHHHHHHHHTTcHHHccc##EEEEEEEEcHHHHHHHHHHHHcccccccEEEEEccccEETTEc######cEEEEEEEEEHHHHHHHHHHHTccHHHHHHHHHHHHHHHHTTccccTTcccHHHHHHHHHHHHH##################################### DISOP:02AL 179-180, 182-184| PSIPRED cEEEEEEcccccccHHHHHHHHHHHHHHHccccccEEEEEEEcHHHHHHHHHHHccccccccEEEcccccccccccccccccccccccEEEEcHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHcccccHHHHHHHHHccHHHHHHHHHcccccccccccc //