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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56281.1
DDBJ      :             putative GTP-binding protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  873/915 : Eukaryota  55/199 : Viruses  0/175   --->[See Alignment]
c.37.1d.52.3
:305 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   13->305 3ievA PDBj 7e-56 39.7 %
:RPS:PDB   15->270 3a1vA PDBj 7e-31 18.7 %
:RPS:SCOP  15->293 1ni3A1  c.37.1.8 * 2e-25 15.6 %
:HMM:SCOP  15->228 2akaB1 c.37.1.8 * 2.1e-40 33.6 %
:HMM:SCOP  188->307 1wf3A2 d.52.3.1 * 2.4e-41 49.2 %
:RPS:PFM   15->175 PF02421 * FeoB_N 3e-06 30.5 %
:HMM:PFM   243->304 PF07650 * KH_2 7e-19 41.1 56/59  
:HMM:PFM   24->121 PF01926 * MMR_HSR1 6.7e-19 27.6 98/108  
:BLT:SWISS 10->305 ERA_MYCSS e-137 78.7 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56281.1 GT:GENE BAD56281.1 GT:PRODUCT putative GTP-binding protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 1612466..1613383 GB:FROM 1612466 GB:TO 1613383 GB:DIRECTION + GB:PRODUCT putative GTP-binding protein GB:PROTEIN_ID BAD56281.1 LENGTH 305 SQ:AASEQ MAERGAEAGFRSGFVCFVGRPNTGKSTLTNALVGAKIAITSSRPQTTRHTIRGIVHREHAQLILVDTPGLHRPRTLLGQRLNDLVRDTYSEVDVIAICIPADEKIGPGDRWIVQQVKQMAPKTTLLGVVTKIDKVGRQQVAEQLLAVSELLGPQAEVVPVSAVRGEQVEVLVDVIAAKMPEGPAFYPDGELTDEPEETLMAELIREAALEGVRDELPHSLAVVIEEVLPREENPDMLDVHALLYVERPSQKAIVIGKGGSRLKEVGTNARKQIEHILGVRIYLHLHVKVAKDWQRDPKQLGKLGF GT:EXON 1|1-305:0| BL:SWS:NREP 1 BL:SWS:REP 10->305|ERA_MYCSS|e-137|78.7|296/299| BL:PDB:NREP 1 BL:PDB:REP 13->305|3ievA|7e-56|39.7|292/302| RP:PDB:NREP 1 RP:PDB:REP 15->270|3a1vA|7e-31|18.7|246/252| RP:PFM:NREP 1 RP:PFM:REP 15->175|PF02421|3e-06|30.5|151/188|FeoB_N| HM:PFM:NREP 2 HM:PFM:REP 243->304|PF07650|7e-19|41.1|56/59|KH_2| HM:PFM:REP 24->121|PF01926|6.7e-19|27.6|98/108|MMR_HSR1| GO:PFM:NREP 4 GO:PFM GO:0005525|"GO:GTP binding"|PF02421|IPR011619| GO:PFM GO:0015093|"GO:ferrous iron transmembrane transporter activity"|PF02421|IPR011619| GO:PFM GO:0015684|"GO:ferrous iron transport"|PF02421|IPR011619| GO:PFM GO:0016021|"GO:integral to membrane"|PF02421|IPR011619| RP:SCP:NREP 1 RP:SCP:REP 15->293|1ni3A1|2e-25|15.6|262/296|c.37.1.8| HM:SCP:REP 15->228|2akaB1|2.1e-40|33.6|211/0|c.37.1.8|1/1|P-loop containing nucleoside triphosphate hydrolases| HM:SCP:REP 188->307|1wf3A2|2.4e-41|49.2|118/0|d.52.3.1|1/1|Prokaryotic type KH domain (KH-domain type II)| OP:NHOMO 1134 OP:NHOMOORG 928 OP:PATTERN -------------------------------------------------------------------- 2121111111211111111-1111111111111111111111211111111111111111111211111111122111111212-111111111111--11111111121----------1111-2111121112112221---111121111111111111111111111111111111111111112213111111111111111112122121111111111111111121111111111111111111111111111111111111111111111111111111111111111111111111212221111111111111111222222222222233222212212111232222111222222122212-1112111112111121112121111111111-2-111111112111122111221122122111111111111222222222222111111111111111121121222212211111-1111111111111211111111111111111111121111111111111111111111211111111111222211111112122122222122223222111122211111111111111111111111111221111111111111111111111111111111-21112-1-11111211111112111111-1111111112111111111111121121111111111111111111112111-111111111111--1111111111111112222212111-121111111111111111111111111111111111111111121111111111111122222222233222111-------1111111111111111-111211-1111111111111221132333--- ----11----1----------------------------------------------------------------------------------1----------1--12-222-11-1--11---1--------------21111111--1---111------1---1----11112127322222132-2212211-1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 305 STR:RPRED 100.0 SQ:SECSTR ccHHHHHTTcHHHHEEEEccTTccHHHHHHHHHTTcEEEEEEcTTcccEEEEEEEEETTEEEEEEEcccccccccccHccHHHHHHHHHHHHccccEEEEEEEcccccHHHHHHHHHHHTTTccEEEEEEcHHHHHHTTccccHHHHHHHHcHcccEEEccTTTcTTHHHHHHHHHHHHTccccccccccHHHHHHHHHHHHHHTTccccccHHHHHHHHHTTcHHHHHHHccTHHTTcccccHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHcccccEEEEEEEEETTcccHHHHHHHcccc DISOP:02AL 1-9| PSIPRED cccccccccccccEEEEEEcccccHHHHHHHHHcccccEEccccccEEEEEEEEEEEccEEEEEEEcccccccHHHHHHHHHHHHHHHHHcccEEEEEEEccccccHHHHHHHHHHHHHccccEEEEEEEccccccHHHHHHHHHHHHHHHcccccEEEEEccccccHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHcccccccHHHEEEEEEEEEcccccEEEEEEEEEEEccccEEEEEcccccHHHHHHHHHHHHHHHHHcccEEEEEEEEEcccccccHHHHHHHcc //