[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56282.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  5/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.93.1
:944 amino acids
:PSIPRED
:DISOPRED
:RPS:SCOP  551->889 1usgA  c.93.1.1 * 1e-04 17.2 %
:RPS:PFM   549->646 PF01094 * ANF_receptor 1e-05 33.0 %
:BLT:SWISS 536->641 PROB_POLNA 7e-04 28.4 %
:PROS 454->465|PS00070|ALDEHYDE_DEHYDR_CYS
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56282.1 GT:GENE BAD56282.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 1613519..1616353 GB:FROM 1613519 GB:TO 1616353 GB:DIRECTION + GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD56282.1 LENGTH 944 SQ:AASEQ MPEANDIGKLLELVRALNVPDARPRVLRTMIRRRRPLPRPIVGLVGTPATGPLLVEIYRWLGESGGRRATPRARVDLSAADLPPDALAPDPNATGEEIAGHCLPILQRLVEGFSTDDTAMGPIKFPRYRTADWLTRQRVTSDETEAAVELRARLPRLLRSGSPAASATDAGEAAAGDIVSRTVFAVFALWPVLRLWLWISGRIPGMSKVTRWFMHQRYLAPELSDSFLGFATRLTASRRSDENEEQLAKLLVHAFLEDLRDAYRRHIWRPSGWRRTAYPVALLGPVAEGSAAARLLGWINDIRNETGQFDPLVVLACLDTPPARPPVRDLARVGDLAHLDTLESLVDRPYAEQEPDPLQRWLRNIENMRTNRLSYAWFLPLRVRLPDPLNGRVRDPGYAHLAVPPAPPLAARRWFVAMSVLVPVALLVAAALVYVPPLRGAPCAHWPWTSGIAVQLRGEECVGYSDNADQVFTDDPELAAMQREVFRLNARAAVARRDNPRRPLVSLVYFSGLSYTDTNVRYPHAQVEELAGLAVQQRRALLASDESEPLLRVIVANGGSDMQHATWVVDHQLRGLIADDPGVLGVIGLDRSNAETRRAIGRLGEFGVPVVATTLSADGLAEASPLYFQAAPSNATQARLIADYVQGARHPAGSAQAGQPRYRRVSVYHPEAAEDIYVTTLVADLKSELARRAIDYDAHTWRIQQELNRFPAPCETDDFDPGTLLFYAGRNEDFPTFARSVSRGCLTGQAPAILGNDTLTRVITDPRATAALPANLTVRYVAKAAPVLLGGARCITGVAELGDQPVPIEYEQLCRELPGLIEDLRRYPELADYHPSWAGDRTGLAFDVSGLFLAAVRAGRHTDLPPNRTAIAMQLRERDYQGITGTLGFGASRVADGSSIAVLVTESVGQTGPQRCLVMLPRAQGDGCPAGTGSALEDWADPPG GT:EXON 1|1-944:0| BL:SWS:NREP 1 BL:SWS:REP 536->641|PROB_POLNA|7e-04|28.4|102/100| PROS 454->465|PS00070|ALDEHYDE_DEHYDR_CYS|PDOC00068| TM:NTM 2 TM:REGION 178->200| TM:REGION 415->437| SEG 23->42|rprvlrtmirrrrplprpiv| SEG 76->91|dlsaadlppdalapdp| SEG 164->175|aasatdageaaa| SEG 401->411|lavppapplaa| SEG 416->438|vamsvlvpvallvaaalvyvppl| RP:PFM:NREP 1 RP:PFM:REP 549->646|PF01094|1e-05|33.0|91/319|ANF_receptor| RP:SCP:NREP 1 RP:SCP:REP 551->889|1usgA|1e-04|17.2|268/345|c.93.1.1| OP:NHOMO 5 OP:NHOMOORG 5 OP:PATTERN -------------------------------------------------------------------- ----1-------------------------------1-----------------------------11-1----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-5, 158-166, 237-242, 651-659, 943-944| PSIPRED cccHHHHHHHHHHHHHHccccccHHHHHHHHHHcccccccHHHHcccccccHHHHHHHHHHccccccccccccEEEEEcccccccccccccccHHHHHccccHHHHHHHHHHHccccccccccccccHHHHHHHHHccccccccHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHEEEEEcccccccHHHHHHHHHcccccccccccHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHccccccccccccccEEEEEcccccHHHHHHHHHHHHHHHHHccccEEEEEEEcccccccccHHHHHHHccHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHcccEEEEEEEEEEEcccccccccccccEEEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccEEEEEcccEEEccccccccEEccccHHHHHHHHHHHHHHHHHHHccccccccHHEEEEEccccccccccccHHHHHHHHHHHHHHHHHHHHcccccccEEEEEEEcccccHHHHHHHHHHHHHHHccccccEEEEEEcccccHHHHHHHHHHHHccccEEEEcccccccccccccEEEEcccccHHHHHHHHHHHHcccccccccccccccEEEEEEccccccHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHccccccccccccccEEEEEEccccccHHHHHHHHcccccccccEEEcccHHHHHcccccccEEcccccHHHHHHHHHHHHcccHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHccHHHcccccccccccccEEEHHHHHHHHHHcccccccccccHHHHHHHHHcccccccEEcccccHHccccccEEEEEEcccccccccEEEEEEEcccccccccccccHHHHcccccc //