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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56284.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  90/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
c.95.1
:347 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   2->157 3il3A PDBj 2e-09 27.1 %
:RPS:PDB   21->304 1b65A PDBj 3e-14 8.0 %
:RPS:SCOP  2->153 1eblA1  c.95.1.2 * 2e-24 24.1 %
:RPS:SCOP  254->342 1u0mA2  c.95.1.2 * 2e-04 10.1 %
:HMM:SCOP  2->201 1hnjA1 c.95.1.2 * 3e-25 32.2 %
:HMM:SCOP  203->347 1hnjA2 c.95.1.2 * 3e-12 22.3 %
:HMM:PFM   266->343 PF08541 * ACP_syn_III_C 3.6e-12 26.9 78/90  
:HMM:PFM   119->153 PF08545 * ACP_syn_III 8.3e-07 37.1 35/80  
:BLT:SWISS 2->153 FABH_AZOSE 1e-13 34.8 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56284.1 GT:GENE BAD56284.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 1619345..1620388 GB:FROM 1619345 GB:TO 1620388 GB:DIRECTION + GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD56284.1 LENGTH 347 SQ:AASEQ MRIRSAVAELPARVVTNDDIVGWIGEHSAGHFEGDLDAALRKVDYYLRYAGSRERRWLDAGERPIDLLRRAANTALDRAEVRPEDVDLLIYTGIGRGFIEPGGAYHSAAALGLRNAHCFDILDACMSWTRAVQVTDALFRSGTHRTAMIVNAECNLRSGGVVFPHLFRIPEVGALESVFPAYTLGEAATATVLTAEDNEPWRFEFASRPDLAPLCNVTLDGYDGYCDPSDKLAANGVGFFTSYGFEMHEQGAADAHAVFERLDPPVDEVAALFTHASSQRYWQGMADKAGLGHAIHHVFERTGNVVSASVPAAIASALELGVLAPGERAVGWVGSAGMSFAAFSFVL GT:EXON 1|1-347:0| BL:SWS:NREP 1 BL:SWS:REP 2->153|FABH_AZOSE|1e-13|34.8|138/321| SEG 305->317|vvsasvpaaiasa| BL:PDB:NREP 1 BL:PDB:REP 2->157|3il3A|2e-09|27.1|140/315| RP:PDB:NREP 1 RP:PDB:REP 21->304|1b65A|3e-14|8.0|262/363| HM:PFM:NREP 2 HM:PFM:REP 266->343|PF08541|3.6e-12|26.9|78/90|ACP_syn_III_C| HM:PFM:REP 119->153|PF08545|8.3e-07|37.1|35/80|ACP_syn_III| RP:SCP:NREP 2 RP:SCP:REP 2->153|1eblA1|2e-24|24.1|137/174|c.95.1.2| RP:SCP:REP 254->342|1u0mA2|2e-04|10.1|89/148|c.95.1.2| HM:SCP:REP 2->201|1hnjA1|3e-25|32.2|171/0|c.95.1.2|1/1|Thiolase-like| HM:SCP:REP 203->347|1hnjA2|3e-12|22.3|139/0|c.95.1.2|1/1|Thiolase-like| OP:NHOMO 94 OP:NHOMOORG 91 OP:PATTERN -------------------------------------------------------------------- --1---------------------------------2-------1--1------1---------1-----------------------------------------------------------11----------111-------------------------------------------------11--------------------1------------------------------------------------------------1--1---------------------------------------11---111-----1-------1-11----111-----------------------1----------------1------1----------------11-11-1------------------------------1-----------------11-1--------------------------------111-1----2-----1121--1--1--1---------1-1----------1-------------1--1---11-------------1-----1-11111---1----11111-1-1111111-1----------1--------------------------------------------------------------------------------1------------------------------------------------------------1---1111-------------------------------------------------------------------------------------------1-------------------------------------1 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 345 STR:RPRED 99.4 SQ:SECSTR HEEEEEEEEcccEEEEHHHHGTccccccccTTccGGGcTTcEEEEEEEEcccccTTcccccEEEEEEEETTTTccccccEEEEEEEEEEccccccccHHHHHHHcEEcccEEEEEGGGHHHHcHHHHHHHHHHHTHHHHccccccccccEEEEEcGGcTTTccGGGcccccEEEEEEEEHHHHHHHHHTcEEEcccccccccccGGGTTcEETEEEcTEEcEEEEEEEEEEETTEEEEEEEEEEEccccGGGcTTccHHHHccTTcHHHHcEEEEEEcccccHHHHHHHHHHHHHHHTTTcccccGGGHHHHHHHHHHHTTcccTTcEEEEEEEEGGGEEEEEEE## PSIPRED cEEEEEEEEcccccccHHHHHHHHcccccccHHHHHHHHHHccHHHHHcccccEEEEEcccccHHHHHHHHHHHHHHHccccHHHccEEEEEccccccccccHHHHHHHHHcccccEEEEEccHHHHHHHHHHHHHHHHHHccccEEEEEEEccccccccccHHHHHcccccccHHHHHHHEEEccccEEEEEEcccccccEEEEEEccccccccccccccccccccccccHHccccccEEEcHHHHHHHHHHHHHHHHHHHcccHHHccEEEEccccHHHHHHHHHHccccHHHEEEHHHcccccccHHHHHHHHHHHHcccccccEEEEEEEcccccEEEEEEEc //