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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56287.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  64/915 : Eukaryota  3/199 : Viruses  0/175   --->[See Alignment]
c.3.1
:498 amino acids
:PSIPRED
:DISOPRED
:RPS:SCOP  143->220 1mo9A1  c.3.1.5 * 2e-04 10.5 %
:HMM:SCOP  11->247 1w4xA1 c.3.1.5 * 1.1e-13 25.1 %
:HMM:SCOP  172->407 1ps9A2 c.3.1.1 * 0.00011 26.5 %
:HMM:SCOP  396->489 1jnrA2 c.3.1.4 * 5.6e-05 30.6 %
:HMM:PFM   15->463 PF07992 * Pyr_redox_2 2e-09 26.0 192/202  
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56287.1 GT:GENE BAD56287.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 1624204..1625700 GB:FROM 1624204 GB:TO 1625700 GB:DIRECTION + GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD56287.1 LENGTH 498 SQ:AASEQ MSTPDRPRTLTEAAVVQIGRGPTGTALARQLLPTLAPGTRYVVIDRDPDAPHLAFGTPEPTHLINTRAAKSSLNPADPDECLRWMTAHAARAGVPVPEFPARRWFGRYVADMFDAAVERARTAGVLVEVVREDAVRVVPGAGTAHRVECAGGFAVEAPRVVLCLGMQAQSDPFPGIIGAAGYFADPWRLPELPPRARVAVLGTRLTAIDVFLTLAARGHEGPILLASRSGRLPRLRGSEDVAPVPHVEACMGAAFAAGTLRLADFGRALMADIEAASATPPDWREVRDGGPTTTARLAAELAEVDAGADRGWQRVVNGASPTLLPAWQLLADEDRAVFFAEWLTPLLVHGAPIPPATARRVLAAMESGLLRVTGGLAAVRTAGDAFVVHAGGADHEADVVINATGAGTGPDALRREPLLAQLLDTGRLTVHPHGGVRIDVATFEALGPQGAPVRGLHVIGDLTRGAVLVTNDVLALSFQAALAATAMGAEREAGVPIS GT:EXON 1|1-498:0| SEG 125->138|vlvevvredavrvv| SEG 224->238|llasrsgrlprlrgs| SEG 292->303|tttarlaaelae| SEG 474->486|lalsfqaalaata| HM:PFM:NREP 1 HM:PFM:REP 15->463|PF07992|2e-09|26.0|192/202|Pyr_redox_2| RP:SCP:NREP 1 RP:SCP:REP 143->220|1mo9A1|2e-04|10.5|76/261|c.3.1.5| HM:SCP:REP 11->247|1w4xA1|1.1e-13|25.1|203/0|c.3.1.5|1/2|FAD/NAD(P)-binding domain| HM:SCP:REP 172->407|1ps9A2|0.00011|26.5|132/162|c.3.1.1|2/2|FAD/NAD(P)-binding domain| HM:SCP:REP 396->489|1jnrA2|5.6e-05|30.6|85/357|c.3.1.4|1/1|FAD/NAD(P)-binding domain| OP:NHOMO 71 OP:NHOMOORG 67 OP:PATTERN -------------------------------------------------------------------- ------------------------------------1----1-1-----------------------1---------------------------------------1--------------------------------------------1------------------------------------------------------------------------------------------------11-1---------------------------------------------------------------------------------------------------------------------------1---------1-11--------------------11111-1--1---11-1--222111--------1----------------21-11--------------------------------1--------------1111----111111-------------------------------------------------------------------------1--------------------------------------------------------1-----------------------------------------------------111--------------------------------------------------------1-----------------------------1------11--------11--------------------------11111111--------------------------------------------------------------- -----------------------111----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-8, 492-494, 496-498| PSIPRED ccccccccccccccEEEEcccHHHHHHHHHHHHHcccccEEEEEEccccccccccccccccHHEEccHHHEEccccccHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHcccccEEEEEEEEEEEEEEccccEEEEEEccccEEEEEEEEEEEcccccccccccccccccccccccccccccccccEEEEEccHHHHHHHHHHHHcccccEEEEEEEccccccccccccccccccccHHcccccccccccHHHHHHHHHHHHHHHHHccccHHHHHccHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHcccEEEEccEEEEEEccccEEEEEccccccccEEEEccccccccccccccHHHHHHHHcccEEEcccccEEEEcccccEEcccccccccEEEEEccccccHHHHHccHHHHHHHHHHHHHHHcccccccccc //