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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56293.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  12/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.23.10
:311 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   40->297 1escA PDBj 4e-06 30.0 %
:RPS:PDB   35->309 3bzwF PDBj 6e-16 18.7 %
:RPS:SCOP  35->309 3bzwA1  c.23.10.9 * 2e-17 17.4 %
:HMM:SCOP  35->310 1esdA_ c.23.10.1 * 3e-54 33.7 %
:HMM:PFM   39->212 PF00657 * Lipase_GDSL 0.00011 17.8 129/235  
:BLT:SWISS 40->297 ESTA_STRSC 1e-05 30.0 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56293.1 GT:GENE BAD56293.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 1631020..1631955 GB:FROM 1631020 GB:TO 1631955 GB:DIRECTION + GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD56293.1 LENGTH 311 SQ:AASEQ MTLPSRVRLTAAALGWAAALVLAAVTPAQAAPAAEGKSLVVLGDSFTANGDIAAALENAAPGAKSDCSHSPTSWPTQLAQATGVWGTADFADLSCRGASLVSGPGLTLVHQARNADAQGAFGPRTRAVFIQSGLNDAWGENTVKLRQTLLNCVLDLVRGCGPEAAEQGRATDFRGVNGALYADKIRPVVQYVRYYAPNARIVLVGYPEMNAPGQQHWCVDVLGLGSIVQQRAGAAIALWDRMDAAQREAAALLGVEFFDARAVTAGHGLCSPEPWLAGILDPRSELMGTPLHPSARGDAAVAAGLRELIPS GT:EXON 1|1-311:0| BL:SWS:NREP 1 BL:SWS:REP 40->297|ESTA_STRSC|1e-05|30.0|240/345| TM:NTM 1 TM:REGION 9->31| SEG 9->34|ltaaalgwaaalvlaavtpaqaapaa| BL:PDB:NREP 1 BL:PDB:REP 40->297|1escA|4e-06|30.0|240/302| RP:PDB:NREP 1 RP:PDB:REP 35->309|3bzwF|6e-16|18.7|225/235| HM:PFM:NREP 1 HM:PFM:REP 39->212|PF00657|0.00011|17.8|129/235|Lipase_GDSL| RP:SCP:NREP 1 RP:SCP:REP 35->309|3bzwA1|2e-17|17.4|235/248|c.23.10.9| HM:SCP:REP 35->310|1esdA_|3e-54|33.7|273/0|c.23.10.1|1/1|SGNH hydrolase| OP:NHOMO 18 OP:NHOMOORG 12 OP:PATTERN -------------------------------------------------------------------- ------13222-11----------------------11----1----------------------12-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 275 STR:RPRED 88.4 SQ:SECSTR ##################################TTcEEEEEEcTTTccccccTTcccTccTTTTTTGGGcccHHHHHHHHHccHTccEEEEcccTTccGGGHHcccGGGHHHHHHHHHHHHTTTccEEEEEcHHHHHGGTTccccccEEEEEEEEEEcccccEEEEEEEEEccEccTTcHHHHHHHHHHHHHHHcTTcEEEEEcccccccEEccTTcEEccTTcccTTcccHHHHHcHHHHHHHHHHHHHHHTccEEcHHHHTccTcGGGGGGEEETTTEGEEETTTEEEEEcHHHHHHHHHHHHGGG## DISOP:02AL 1-7| PSIPRED cccHHHHcccHHHHHHHHHHHHHcccccccccccccccEEEEccccccccccccccccccccccccccccccHHHHHHHHHHcccccEEEEEEEEEcEEEEcccccccccHHHcccccccccccccEEEEEEccccccccccccHHHHHHHHHHHHcccccccccccHHHcccccccHHHHHHHHHHHHHHHHHHccccEEEEEEccEEEcccccEEcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccEEEccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHccc //