[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56295.1
DDBJ      :             putative hydrolase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  41/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
c.69.1
:288 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   13->271 2v9zA PDBj 2e-08 25.2 %
:RPS:PDB   11->281 3e3aB PDBj 3e-22 21.1 %
:RPS:SCOP  11->284 1iunA  c.69.1.10 * 4e-23 17.3 %
:HMM:SCOP  3->285 1cv2A_ c.69.1.8 * 5.3e-47 29.9 %
:HMM:PFM   56->279 PF00561 * Abhydrolase_1 1.2e-11 22.0 214/231  
:HMM:PFM   30->63 PF12146 * Hydrolase_4 0.00071 38.2 34/79  
:BLT:SWISS 22->283 YUGF_BACSU 3e-11 24.9 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56295.1 GT:GENE BAD56295.1 GT:PRODUCT putative hydrolase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 1633348..1634214 GB:FROM 1633348 GB:TO 1634214 GB:DIRECTION + GB:PRODUCT putative hydrolase GB:PROTEIN_ID BAD56295.1 LENGTH 288 SQ:AASEQ MTHSSALGRQREIDLPGGRIRYYETGSGSPVVFVHGLLVNANLWRKVVPDIAAAGYRCLAPDWPLGAHSIPVPEADLSPAGLADLIAAFLDRLDLTDVTLVANDTGGAITQVLLARQRARIARVVLASVDCYERFLPPPFKLLTPLARIPGSLRPATELLRIRALHPLPIALGWVVKRPVPPEVVDTYLLPSRRSGAIRHDLRRFLAGARNSYTLEAARHFGEIDLPVLLVWAREDKLFPVRLAERLAADLPNATLRFVDDSYTAIPEDQPAALTELILDFTRQHAAT GT:EXON 1|1-288:0| BL:SWS:NREP 1 BL:SWS:REP 22->283|YUGF_BACSU|3e-11|24.9|249/273| SEG 90->101|ldrldltdvtlv| SEG 135->146|flpppfklltpl| BL:PDB:NREP 1 BL:PDB:REP 13->271|2v9zA|2e-08|25.2|254/302| RP:PDB:NREP 1 RP:PDB:REP 11->281|3e3aB|3e-22|21.1|261/275| HM:PFM:NREP 2 HM:PFM:REP 56->279|PF00561|1.2e-11|22.0|214/231|Abhydrolase_1| HM:PFM:REP 30->63|PF12146|0.00071|38.2|34/79|Hydrolase_4| RP:SCP:NREP 1 RP:SCP:REP 11->284|1iunA|4e-23|17.3|260/272|c.69.1.10| HM:SCP:REP 3->285|1cv2A_|5.3e-47|29.9|278/0|c.69.1.8|1/1|alpha/beta-Hydrolases| OP:NHOMO 57 OP:NHOMOORG 42 OP:PATTERN -------------------------------------------------------------------- ----1---------23111-11--2111111212323-22-2---1--------------------2-1-------------------------------------1-------------------------1--1111--------------------------1-----------------1----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1--------------------------------------------------------------------------------------------------------------------------1------------------1-------------------------------------------------------------1-----------------------------------------------1--------------------------------------------------------------------------------------------------------------------------------------------------------------------------1--------------------------------------------------------------------------------------------------------- ---------------------1--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 281 STR:RPRED 97.6 SQ:SECSTR #######cccccTTccccEEEEEEEcccEEEEEEccTTccGGGGTTHHHHHHHTTEEEEEEccTTTTcGGGTTcccccHHHHHHHHHHHHHHTTcccEEEEEETHHHHHHHHHHHHcGGGEEEEEEEEEcccccccHHHHHHHHHHHHHHHTTccccHHHHHHHHHHHHccHHHHTcHHHHHHHHHHHGGGHHccccccHHHHHHTTcccccccGGGGGHHHGccccEEEEEETTcccccHHHHHHHHHHcTTEEEEEETTccTTHHHHcHHHHHHHHHHHGGGHccc DISOP:02AL 1-4, 286-288| PSIPRED ccccccccccEEEEEccEEEEEEEEccccEEEEEEcccccHHHHHHHHHHHHHcccEEEEEEccccccccccccccccHHHHHHHHHHHHHHHccccEEEEEEcHHHHHHHHHHHHcHHHHcEEEEEcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHccccHHHHHHHHHHHHHHHHcHHHHHHHHccccccEEEEEccccccccHHHHHHHHHHccccEEEEEcccccccccccHHHHHHHHHHHHHHHccc //