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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56296.1
DDBJ      :             putative transcriptional regulator
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  55/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.4.1
:162 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   2->147 2hytA PDBj 1e-11 35.8 %
:RPS:PDB   2->147 3br3B PDBj 4e-09 12.6 %
:RPS:SCOP  2->32 1z77A1  a.4.1.9 * 1e-05 32.3 %
:HMM:SCOP  1->51 1t33A1 a.4.1.9 * 2.9e-06 43.1 %
:HMM:PFM   2->25 PF00440 * TetR_N 2e-07 41.7 24/47  
:HMM:PFM   32->142 PF03710 * GlnE 4.8e-05 26.7 86/248  
:BLT:SWISS 3->56 ACRR_SHIFL 4e-04 40.4 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56296.1 GT:GENE BAD56296.1 GT:PRODUCT putative transcriptional regulator GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 1634315..1634803 GB:FROM 1634315 GB:TO 1634803 GB:DIRECTION + GB:PRODUCT putative transcriptional regulator GB:PROTEIN_ID BAD56296.1 LENGTH 162 SQ:AASEQ MAAAGVTRGALQYHYGDKRGLFVAVLEQLERENSAELAAAMAAVPPSNDPMAGLREGLDTFLRICRRPEMVQIALSDAPAVLGWHAWRDFEVRYGLGLLIEQFEAARSLGLLADAPVRMLAQVVLSAVTEAGMIVAHSEDQATAHAQALDALVLLIGGLLRS GT:EXON 1|1-162:0| BL:SWS:NREP 1 BL:SWS:REP 3->56|ACRR_SHIFL|4e-04|40.4|52/215| SEG 35->43|aelaaamaa| SEG 148->160|aldalvlliggll| BL:PDB:NREP 1 BL:PDB:REP 2->147|2hytA|1e-11|35.8|134/188| RP:PDB:NREP 1 RP:PDB:REP 2->147|3br3B|4e-09|12.6|143/183| HM:PFM:NREP 2 HM:PFM:REP 2->25|PF00440|2e-07|41.7|24/47|TetR_N| HM:PFM:REP 32->142|PF03710|4.8e-05|26.7|86/248|GlnE| RP:SCP:NREP 1 RP:SCP:REP 2->32|1z77A1|1e-05|32.3|31/75|a.4.1.9| HM:SCP:REP 1->51|1t33A1|2.9e-06|43.1|51/0|a.4.1.9|1/1|Homeodomain-like| OP:NHOMO 58 OP:NHOMOORG 55 OP:PATTERN -------------------------------------------------------------------- --------------11111-1---1-111111-1113----211-1----------------1--11---------------1---------------------------------------------------------------------------------1------------------------------------------------------------------1---------------------------------------------------------------------------------1-----------------------------------------------------------------1-------1-------1-1----------------------1--11---1---11--------------1----------------------------------------------------------------------------------------------------------------------------------------------------------------------1--------------------------------------------------------------1----------------------------------11-----------------------------------------------------------------------------1--------1111-1-1-111-----------------------------11----------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 146 STR:RPRED 90.1 SQ:SECSTR #HHTTccHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHGGGcccHHHHHHHHHHHHHHccccGGGHHHHHHHHHHTTccHHHHHHHHHHHHHHHHHHHHHHHHTTccccccHHHHHHHHHHHHHHHHHHccccHHHHHHHHH############### DISOP:02AL 162-163| PSIPRED cccccccHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHcccccEEHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHcc //