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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56298.1
DDBJ      :             putative undecaprenyl pyrophosphate synthetase
Swiss-Prot:             

Homologs  Archaea  65/68 : Bacteria  871/915 : Eukaryota  186/199 : Viruses  0/175   --->[See Alignment]
c.101.1
:267 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   31->264 2vg2D PDBj 5e-90 62.8 %
:RPS:PDB   38->260 2e98A PDBj 6e-75 34.5 %
:RPS:SCOP  32->259 1f75A  c.101.1.1 * 5e-62 32.9 %
:HMM:SCOP  33->260 1jp3A_ c.101.1.1 * 1.5e-81 49.6 %
:RPS:PFM   44->265 PF01255 * Prenyltransf 4e-42 42.8 %
:HMM:PFM   44->264 PF01255 * Prenyltransf 4.4e-75 43.6 220/223  
:BLT:SWISS 31->265 UPPS2_STRAW 8e-94 72.3 %
:PROS 210->227|PS01066|UPP_SYNTHETASE
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56298.1 GT:GENE BAD56298.1 GT:PRODUCT putative undecaprenyl pyrophosphate synthetase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 1635679..1636482 GB:FROM 1635679 GB:TO 1636482 GB:DIRECTION + GB:PRODUCT putative undecaprenyl pyrophosphate synthetase GB:PROTEIN_ID BAD56298.1 LENGTH 267 SQ:AASEQ MEPVILRRDPASATRTVRPPAPHPSGARPPQLPPELVPNHVALVMDGNGRWAQERGLPRTAGHERGEAVLMDTVEGCIEIGVKWLSAYAFSTENWRRSPEEVRFLMGFNRDVIRRRRDEMHEMGVRVRWAGRRPRLWRSVIKELEVAEELTKDNTVLTLTMCVNYGGRAEIADAAREIARRVAAGEIDPERVDERTVARFLDEPDMPDVDLFLRPSGEFRTSNFLLWQSAYAEYVFQETLFPDFDRRNLWEACLQYASRDRRFGGTK GT:EXON 1|1-267:0| BL:SWS:NREP 1 BL:SWS:REP 31->265|UPPS2_STRAW|8e-94|72.3|235/285| PROS 210->227|PS01066|UPP_SYNTHETASE|PDOC00817| SEG 18->30|rppaphpsgarpp| SEG 166->187|ggraeiadaareiarrvaagei| BL:PDB:NREP 1 BL:PDB:REP 31->264|2vg2D|5e-90|62.8|234/284| RP:PDB:NREP 1 RP:PDB:REP 38->260|2e98A|6e-75|34.5|223/226| RP:PFM:NREP 1 RP:PFM:REP 44->265|PF01255|4e-42|42.8|222/222|Prenyltransf| HM:PFM:NREP 1 HM:PFM:REP 44->264|PF01255|4.4e-75|43.6|220/223|Prenyltransf| GO:PFM:NREP 1 GO:PFM GO:0016765|"GO:transferase activity, transferring alkyl or aryl (other than methyl) groups"|PF01255|IPR001441| RP:SCP:NREP 1 RP:SCP:REP 32->259|1f75A|5e-62|32.9|216/217|c.101.1.1| HM:SCP:REP 33->260|1jp3A_|1.5e-81|49.6|228/228|c.101.1.1|1/1|Undecaprenyl diphosphate synthase| OP:NHOMO 1346 OP:NHOMOORG 1122 OP:PATTERN --111111111111111111111111111111111111111111111111111111111111111-11 1221222222222222222-22223222222322222222222222222222222222222222222233211111111111111111111111111--11111111111111111111111111111111111111111111111221111111111111111111222111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111121111111111111111111111111211111111111112111111-----112221111122111111111111-222222211111111111111111111111111111111111111111111111111------111111111111111111111111111111111112111111111111111111111111111111111112111111111111111111111111111111111111111111111111111111121111-1111111111111111111111111111111111111111111111111111111-1111111-11111111111111111111-111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111-11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111------------------1------1111111111111 -1--111-11-11111111111111211111112121111111111111111111111111121222211222222222221221111-12-1213111112111111412111111-11-11154131BF2-411-1112-121111111111111122111111-121111112212F2222133261982232222 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 234 STR:RPRED 87.6 SQ:SECSTR ##############################HHHcTTcccEEEEEEccHHHHHHHHTccHHHHHHHHHHHHHHHHHHHHHTTccEEEEEEccccGGGccHHHHHHHHHHHHHHTTTHHHHHHHTTcEEEEEcccTTccHHHHHHHHHHHHHHTTccccEEEEEccccHHHHHHHHHHHHHHHHHHTcccGGGccHHHHHTTcTTTTcccccEEEEcccccccTTcccGGGTTcEEEEccccGGGccHHHHHHHHHHHHHHcHHcT### DISOP:02AL 1-2, 8-36, 265-267| PSIPRED cccccccccccccccccccccccccccccccccccccccEEEEEEccccHHHHHccccHHHHHHHHHHHHHHHHHHHHHccccEEEEEEEEHHcccccHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEEccccccHHHHHHHHHHHHHHHccccEEEEEEEccccHHHHHHHHHHHHHHHHHccccHHHccHHHHHHHccccccccccEEEEccccEEccccHHHHHHccEEEEcccccccccHHHHHHHHHHHHHHHccccccc //