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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56305.1
DDBJ      :             putative transcriptional regulator
Swiss-Prot:             

Homologs  Archaea  8/68 : Bacteria  40/915 : Eukaryota  4/199 : Viruses  0/175   --->[See Alignment]
a.132.1
:201 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   21->198 2gm8C PDBj 3e-18 31.2 %
:RPS:PDB   1->199 2a2oD PDBj 1e-23 16.7 %
:RPS:SCOP  1->199 1uddA  a.132.1.3 * 1e-39 22.6 %
:HMM:SCOP  1->200 1z72A1 a.132.1.3 * 1.1e-46 37.2 %
:RPS:PFM   12->200 PF03070 * TENA_THI-4 1e-13 31.2 %
:HMM:PFM   12->199 PF03070 * TENA_THI-4 1.2e-32 32.4 188/210  
:BLT:SWISS 13->201 THI22_SCHPO 3e-15 28.3 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56305.1 GT:GENE BAD56305.1 GT:PRODUCT putative transcriptional regulator GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(1641312..1641917) GB:FROM 1641312 GB:TO 1641917 GB:DIRECTION - GB:PRODUCT putative transcriptional regulator GB:PROTEIN_ID BAD56305.1 LENGTH 201 SQ:AASEQ MSLSAHLEEIGRPLVEEQRRHPTVAGIAAGDLPEPVFRSWLEQDYLYLLDYVRVFSRLAWQAPDAHLGDLVDLAHSTFHDELALHRSLAAEFGADLDNAVKGAPCAAYTAFLLDAAADYADGLAALYPCMWGYSTLGALLAADPPAEPRYRRWVETYADPGFAALTRRCAQMLDESGADPARAETLFREAMRHELAFWDVP GT:EXON 1|1-201:0| BL:SWS:NREP 1 BL:SWS:REP 13->201|THI22_SCHPO|3e-15|28.3|187/551| SEG 106->127|aaytaflldaaadyadglaaly| BL:PDB:NREP 1 BL:PDB:REP 21->198|2gm8C|3e-18|31.2|176/215| RP:PDB:NREP 1 RP:PDB:REP 1->199|2a2oD|1e-23|16.7|192/223| RP:PFM:NREP 1 RP:PFM:REP 12->200|PF03070|1e-13|31.2|189/208|TENA_THI-4| HM:PFM:NREP 1 HM:PFM:REP 12->199|PF03070|1.2e-32|32.4|188/210|TENA_THI-4| RP:SCP:NREP 1 RP:SCP:REP 1->199|1uddA|1e-39|22.6|199/215|a.132.1.3| HM:SCP:REP 1->200|1z72A1|1.1e-46|37.2|199/0|a.132.1.3|1/1|Heme oxygenase-like| OP:NHOMO 53 OP:NHOMOORG 52 OP:PATTERN ------------------------1---1111-----------------------1----1--1---- -------------1-------1-----------1111----1----1------------------------------------------------------------1-----------------------------1111---1---1------------------1------------------------1---------------111------------1-------111--------------1------------------------------------------------------------------------------------------------------------------1-----------------------1--------------------------------------11-111--1----1-1-------------------------------------------------------------------------------------------------------------------------------------1--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-----1---------------------1--1----------------------------------------------------------------------------------------------------- --------------------1---------111---------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 200 STR:RPRED 99.5 SQ:SECSTR TcHHHHHHHHTHHHHHHHHTcHHHHHHHHTcccHHHHHHHHHHHHHHHHHHHHHHHHHHHTcccHHHHHHHHHHHHHHHHHHHHHHHHHHTcccccGGGccccHHHHHHHHHHHHHHHccTHHHHHHHHHHHHHHHHHHHGGGccTTcTTHHHHHHHccccHHHHHHHHHTTGGGccHHHHHHHHHHHHHHHHHHHHHHH# DISOP:02AL 201-202| PSIPRED ccHHHHHHHHHHHHHHHHHccHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHccccHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHcccHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHccc //