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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56306.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  20/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.43.1
:417 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   2->354 1q9jA PDBj 7e-35 32.4 %
:RPS:PDB   23->363 2e1vA PDBj 7e-07 10.3 %
:RPS:SCOP  2->147 1q9jA1  c.43.1.2 * 2e-16 29.5 %
:RPS:SCOP  202->362 1q9jA2  c.43.1.2 * 6e-15 36.9 %
:HMM:SCOP  3->171 1q9jA1 c.43.1.2 * 2.7e-11 23.9 %
:HMM:SCOP  173->415 1q9jA2 c.43.1.2 * 1.1e-42 34.3 %
:HMM:PFM   104->182 PF03007 * UPF0089 0.00019 23.7 76/263  
:BLT:SWISS 2->362 PAPA5_MYCSS 2e-34 32.3 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56306.1 GT:GENE BAD56306.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 1642042..1643295 GB:FROM 1642042 GB:TO 1643295 GB:DIRECTION + GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD56306.1 LENGTH 417 SQ:AASEQ MVVRELAPSEARFVRHGTYTGRSIVVRGALEIAALRAAFTALQREYPVLVCRIVEDAAGGGWLLRPGEAIGAWVAPGDVDAVRIPAEPVDPGRQLAYLDIVPDADRARVTLFAHHAIADARHCVALFARLWQHYTEGVEQGATSVVPHEIPQSLEWYAARRGARRSALSGLEEVATPLSTVAHALPLEPPPPAPPTLARPARVVLDAAATGHIIALGHRHGVTVNGLVTAALLRAVAAEKGGPTAESVPLTCVYPVDLRTRFDPPVAAAAGTNMGGLAGFAAEIGPATGFVPLARRIAARLGHDLAEGVVQQSVLHFPEFFGPRRVHSLAGHVAITNTGVVPAFAMPPGLSVTDYEIVYLSAHPRPSAGAAAAVTFLVYTFAARLCVGVLGGGALADRLPDAVSRELSALAAEPIDA GT:EXON 1|1-417:0| BL:SWS:NREP 1 BL:SWS:REP 2->362|PAPA5_MYCSS|2e-34|32.3|350/410| SEG 158->171|aarrgarrsalsgl| SEG 182->201|ahalpleppppapptlarpa| SEG 227->238|lvtaallravaa| SEG 368->373|agaaaa| SEG 382->399|aarlcvgvlgggaladrl| BL:PDB:NREP 1 BL:PDB:REP 2->354|1q9jA|7e-35|32.4|327/388| RP:PDB:NREP 1 RP:PDB:REP 23->363|2e1vA|7e-07|10.3|331/434| HM:PFM:NREP 1 HM:PFM:REP 104->182|PF03007|0.00019|23.7|76/263|UPF0089| RP:SCP:NREP 2 RP:SCP:REP 2->147|1q9jA1|2e-16|29.5|139/163|c.43.1.2| RP:SCP:REP 202->362|1q9jA2|6e-15|36.9|157/225|c.43.1.2| HM:SCP:REP 3->171|1q9jA1|2.7e-11|23.9|163/175|c.43.1.2|1/1|CoA-dependent acyltransferases| HM:SCP:REP 173->415|1q9jA2|1.1e-42|34.3|233/0|c.43.1.2|1/1|CoA-dependent acyltransferases| OP:NHOMO 20 OP:NHOMOORG 20 OP:PATTERN -------------------------------------------------------------------- --------------1--11-11111-11111111111-----------------------1-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 362 STR:RPRED 86.8 SQ:SECSTR #EEEEccGGGGcHHHHTcEEEEcHHHHHHTHHHHHHHHHHHHHTTcGGGGcEEEEccccccccEEETccEEEEEEEEcccGGGTcccccEEGGGGGGGccccccTEEEEEEEEcGGGccHHHHHHHHHHHHHHHHHTTcccHHHHHHccccccccccccHHHHHHHHHTTcTTHHHHcccccccccccccccEEEEEEEEcHHHHHHHHHHHHHHcTTcccccHHHHHHHHHHHHHHHHHcccHHcccEEEEEEEEEcGGGcccccTTcccEEEEEEEEEGGGTcHHHHHHHHHHHHHHHHHHHHHHHHTTccccHHHHHcccEEEccTTccGGGccccccccEEEEGGGGGccEEEEEEccc###################################################### DISOP:02AL 6-7, 416-417| PSIPRED ccHHHHcccHHHHHHHcEEEcEEEEEEEcccHHHHHHHHHHHHHHHHHHEEEEEEEccccEEEEEEccccccEEEcccHHHHHHHHHHcccccccEEEEEEEcccccEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccHHHcccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHccccccccccEEEEEcccccEEEcccccccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHcccccccccccEEEEEEcccccccccccccEEEEEEEEEEEcccccccHHHHHHHHHHHHHHHHHHHHHHcccHHHHHcHHHHHHHHHHHHcccccc //