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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56307.1
DDBJ      :             putative transcriptional regulator
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  4/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.4.1
:199 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   29->158 3btiB PDBj 6e-06 9.3 %
:RPS:SCOP  29->74 1z77A1  a.4.1.9 * 2e-05 23.9 %
:HMM:SCOP  4->82 2fbqA1 a.4.1.9 * 2.1e-11 30.4 %
:HMM:PFM   13->57 PF00440 * TetR_N 5.2e-10 40.0 45/47  
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56307.1 GT:GENE BAD56307.1 GT:PRODUCT putative transcriptional regulator GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(1643305..1643904) GB:FROM 1643305 GB:TO 1643904 GB:DIRECTION - GB:PRODUCT putative transcriptional regulator GB:PROTEIN_ID BAD56307.1 LENGTH 199 SQ:AASEQ MARPRRFTDDQVLDAARDLLADPATLHPTIAAISAASGVHTGSIYLRFPSRDELLARLWLRSIRRFHVGFVEALGGPDPLLSAAIHLPRYCRAHPTEARAMKMFHHEELLEVGPPELRAEIAGVNDDMNAALRAAVVAEFGAADEHRMAIAEAAVKAIPYGLVRDYIARAAPIPDWVDDVVATATGAVVREFGRRPAPR GT:EXON 1|1-199:0| SEG 9->26|ddqvldaardlladpatl| SEG 177->189|vddvvatatgavv| RP:PDB:NREP 1 RP:PDB:REP 29->158|3btiB|6e-06|9.3|129/186| HM:PFM:NREP 1 HM:PFM:REP 13->57|PF00440|5.2e-10|40.0|45/47|TetR_N| RP:SCP:NREP 1 RP:SCP:REP 29->74|1z77A1|2e-05|23.9|46/75|a.4.1.9| HM:SCP:REP 4->82|2fbqA1|2.1e-11|30.4|79/0|a.4.1.9|1/1|Homeodomain-like| OP:NHOMO 4 OP:NHOMOORG 4 OP:PATTERN -------------------------------------------------------------------- --------------1------1----------1---1-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 147 STR:RPRED 73.9 SQ:SECSTR ############################cHHHHHHTTTcccTTTTTTcccHHHHHHHHHHHHHHHHHHHHHTTcTTcccHHHHHHHHHHHHHHccccTTTHHHHHHHTTcccccTTcTTTHHHHHHHHHHHHHHHHHHHHHHTTccccccHHHHHHHHHHHHHHHHHHHccTTcH######################## DISOP:02AL 1-6, 196-199| PSIPRED ccccccccHHHHHHHHHHHHHHcccccccHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHcccccc //