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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56312.1
DDBJ      :             putative esterase
Swiss-Prot:             

Homologs  Archaea  2/68 : Bacteria  86/915 : Eukaryota  39/199 : Viruses  0/175   --->[See Alignment]
e.3.1
:383 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   48->120 1ci9A PDBj 4e-08 39.7 %
:RPS:PDB   38->383 2dd0E PDBj 3e-29 17.1 %
:RPS:SCOP  10->381 1ci8A  e.3.1.1 * 7e-34 21.0 %
:HMM:SCOP  4->384 1gceA_ e.3.1.1 * 7e-65 34.0 %
:RPS:PFM   39->366 PF00144 * Beta-lactamase 2e-13 31.7 %
:HMM:PFM   21->372 PF00144 * Beta-lactamase 7e-63 32.9 307/329  
:BLT:SWISS 1->360 YS81_CAEEL 4e-41 32.2 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56312.1 GT:GENE BAD56312.1 GT:PRODUCT putative esterase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 1648023..1649174 GB:FROM 1648023 GB:TO 1649174 GB:DIRECTION + GB:PRODUCT putative esterase GB:PROTEIN_ID BAD56312.1 LENGTH 383 SQ:AASEQ MGNVAGTCDPAFAAVREVFEASLAAGADLGAAVAVFVRGRPVVDLWGGTADRRTGRAWEADTPCVAFSSGKAVTAVAALAVMRRTGIEPETPVVDWWPEFGAHGKDAVTTEHLFTHSAGLPVLERPITKAEAADPAAMAAELAGQAPLWEPGTRHGYHALTYGWLVGELVRRGTGRSVGEFVRELVDGELWFGPPAEVIAKAARLEFPAAHEMTWEPGDSASADAVIGRLAAAYRDPDSLLMRSSTNPRGSHNDPAVLAGGWPASGLVATARGLAGFYRDLLGGALIPESLLRDAVRERVRGADEVLLLDSAFGLGMMLPSQTLPVPEAARAGAFGHPGAGGSLGLADPDHDLAFAFVPNMRREALAGDRRAEDLLAAVYAAL GT:EXON 1|1-383:0| BL:SWS:NREP 1 BL:SWS:REP 1->360|YS81_CAEEL|4e-41|32.2|354/473| SEG 21->35|aslaagadlgaavav| SEG 130->143|aeaadpaamaaela| BL:PDB:NREP 1 BL:PDB:REP 48->120|1ci9A|4e-08|39.7|73/377| RP:PDB:NREP 1 RP:PDB:REP 38->383|2dd0E|3e-29|17.1|316/351| RP:PFM:NREP 1 RP:PFM:REP 39->366|PF00144|2e-13|31.7|284/324|Beta-lactamase| HM:PFM:NREP 1 HM:PFM:REP 21->372|PF00144|7e-63|32.9|307/329|Beta-lactamase| RP:SCP:NREP 1 RP:SCP:REP 10->381|1ci8A|7e-34|21.0|357/377|e.3.1.1| HM:SCP:REP 4->384|1gceA_|7e-65|34.0|326/364|e.3.1.1|1/1|beta-lactamase/transpeptidase-like| OP:NHOMO 227 OP:NHOMOORG 127 OP:PATTERN ------------------------1-------------------1----------------------- ----2---------53344-42114444444333335443---------1--111--1---1---12221---------------------------------------------------------------------1--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------2111---------------------------------------11---------------131----------------------------------------------------------3-----------1----------------------------------------------------------------1--------------------11-1-1-------------------------------------1---------------------------------------------------------------------------1-------------------------------------------------------1------------------2222222-111111111211121111111------------------------------------------------------------------------------------------------1 ------------111---121111111111111--------------1111151-------------------------------------------------1---12-------------------------------------------------1---121------67------------2--2112------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 379 STR:RPRED 99.0 SQ:SECSTR ####cccccHHHHHHHHHHHHHHHTTcccEEEEEEEETTcccEEEEEEcccTTTcccccTTccEEcTTHHHHHHHHHHHHHHHTTcccTTccGGGTcTTcccTTGGGccGGGGTTTcccccccTccccccccccHHHHHHHHHHHcccccTTcccccccHHHHHHHHHHHHHHHcccHHHHHHHHTHHHHETTTccccGGGccccEEETccccEETTTccccTTcccTTccccEEEcccTTcccccccEEEcTTTccGGGTGGGTcEEEcHHHHHHHHHHHHTTccccHHHHHHHHTcccEEcccTTccEEEEccccEEEccHEEETTEEEEEEEEEETTEEEEEEEETTTccEEEEEEcEEcccTTcHHHHHHHHHHHHHHH DISOP:02AL 1-2| PSIPRED ccccccccHHHHHHHHHHHHHHHHcccccEEEEEEEEccEEEEEEEccEEEcccccccccccHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHcccccccccccccHHHHHHHHcccccccccccHHHcccHHHHHHHHHHccccccccccEEEccccHHHHHHHHHHHHccccHHHHHHHHHHcccccccccccccccccccccccccccccccccccHHHHHHHHHHcccccccccccccccccccccHHHHHHcccccccEEEcHHHHHHHHHHHHccccccHHHHHHHHHHHcccccccccccccccccEEccccccccccccccccccccccccEEEEEEEcccEEEEEEEccccccccHHHHHHHHHHHHHHHc //