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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56313.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  123/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
:231 amino acids
:PSIPRED
:DISOPRED
:RPS:PFM   65->202 PF02698 * DUF218 1e-16 37.5 %
:HMM:PFM   63->212 PF02698 * DUF218 8.5e-32 37.3 150/155  
:HMM:PFM   30->73 PF10801 * DUF2537 0.00034 47.5 40/84  
:BLT:SWISS 83->185 YGJQ_ECOLI 1e-04 29.3 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56313.1 GT:GENE BAD56313.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 1649206..1649901 GB:FROM 1649206 GB:TO 1649901 GB:DIRECTION + GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD56313.1 LENGTH 231 SQ:AASEQ MISAPQRNRSASAYESGLARGVGAGLARWIRRTVAAAVLMSMVLVGGTAVRVWQVARIDDYTPADAIVVLGAAQYSGTPSSVFEARLDQAYDLFRAGVAPRVITVGGKQEGDLYTEAASGKIYLEGRGVPTEAILAVETGSDTLRSVEAVALAMKAREMSSAVLVSDPWHSLRTRTMARDAGLRAWTAPTRTGPAVYTRESQAHGIARETFALLWYQLTHFSADFPYTAGQ GT:EXON 1|1-231:0| BL:SWS:NREP 1 BL:SWS:REP 83->185|YGJQ_ECOLI|1e-04|29.3|99/230| TM:NTM 1 TM:REGION 33->55| SEG 17->28|glargvgaglar| SEG 34->45|vaaavlmsmvlv| RP:PFM:NREP 1 RP:PFM:REP 65->202|PF02698|1e-16|37.5|136/150|DUF218| HM:PFM:NREP 2 HM:PFM:REP 63->212|PF02698|8.5e-32|37.3|150/155|DUF218| HM:PFM:REP 30->73|PF10801|0.00034|47.5|40/84|DUF2537| OP:NHOMO 139 OP:NHOMOORG 124 OP:PATTERN -------------------------------------------------------------------- 111-1-1111111-----------------------1211-111-------------1-----1212--11--------111--------------------------------------------------------------11---------------------11--------------11-11---1--222221221212111------222-------------11------------------------------------------------------------------------------------------111--1111111-1-1-111----11--------------1-11-1----1------------------------------------------------------------------------------------------------------------------------------1----111111---------------1-----------------------------1-1111111----------------------------------1----------------------------------------------------------------1-----------------------------------------------------1-1-11111-1-1--1---------------------------------------------------------------------------------1--------------------------11111111111111----------------------------------------------------------1 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-15, 229-231| PSIPRED ccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccEEEEEccccccccccHHHHHHHHHHHHHHHHccccEEEEEccccccccccHHHHHHHHHHHccccHHHEEEccccccHHHHHHHHHHHHHHccccEEEEEEccHHHHHHHHHHHHHccEEEEEEcccccccccHHHHHHHHHHHHHHHHHHHHHHccccccccccc //