[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56319.1
DDBJ      :             putative prophage antirepressor
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  3/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
:228 amino acids
:PSIPRED
:DISOPRED
:RPS:PFM   16->87 PF10547 * P22_AR_N 5e-13 44.4 %
:HMM:PFM   6->114 PF10547 * P22_AR_N 1.2e-25 34.9 109/120  
:HMM:PFM   125->162 PF06895 * DUF1267 0.001 23.7 38/74  
:COIL
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56319.1 GT:GENE BAD56319.1 GT:PRODUCT putative prophage antirepressor GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 1654274..1654960 GB:FROM 1654274 GB:TO 1654960 GB:DIRECTION + GB:PRODUCT putative prophage antirepressor GB:PROTEIN_ID BAD56319.1 LENGTH 228 SQ:AASEQ MRGADAALVATLIDDKPHVALRPMCDALGIDADTQARKLKSRSWATTVIRTVVAADGKAREMLMIDRRTMTMWLATIDENRVAESARPVVRAFQAEAADALDAYFATGVAVNPRGTLSTFDVLRAQIDQIEAAHRTAEEAKAIAAKTDARLDAIEGRHDWYSALGYARLHKIENTSTRFLNQVGRQASAIAAAHGIRPVKVPHALYGEVNSLPAWVWERAFSGRDGAA GT:EXON 1|1-228:0| COIL:NAA 30 COIL:NSEG 2 COIL:REGION 125->125| COIL:REGION 129->157| SEG 92->106|afqaeaadaldayfa| SEG 132->150|aahrtaeeakaiaaktdar| RP:PFM:NREP 1 RP:PFM:REP 16->87|PF10547|5e-13|44.4|72/120|P22_AR_N| HM:PFM:NREP 2 HM:PFM:REP 6->114|PF10547|1.2e-25|34.9|109/120|P22_AR_N| HM:PFM:REP 125->162|PF06895|0.001|23.7|38/74|DUF1267| OP:NHOMO 3 OP:NHOMOORG 3 OP:PATTERN -------------------------------------------------------------------- ------------1-----------------------1--------------------------------------1----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-4, 225-228| PSIPRED ccccccEEEEEEEccEEEccHHHHHHHHcccHHHHHHHHHccccccEEEEEEEccccccHHHHcccHHHHccEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHcccHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHccccccccHHHHccccccHHHHHHHHHccccccc //