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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56329.1
DDBJ      :             putative transcriptional regulator
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  1/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.35.1
:244 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   190->240 3bd1B PDBj 8e-05 10.0 %
:RPS:SCOP  188->236 1b0nA2  a.35.1.3 * 4e-04 20.4 %
:RPS:PFM   74->129 PF02467 * Whib 1e-06 44.6 %
:HMM:PFM   74->132 PF02467 * Whib 3.6e-18 44.1 59/66  
:HMM:PFM   191->217 PF01381 * HTH_3 1.4e-05 25.9 27/55  
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56329.1 GT:GENE BAD56329.1 GT:PRODUCT putative transcriptional regulator GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 1657737..1658471 GB:FROM 1657737 GB:TO 1658471 GB:DIRECTION + GB:PRODUCT putative transcriptional regulator GB:PROTEIN_ID BAD56329.1 LENGTH 244 SQ:AASEQ MNRFLEVDYAPREFTPEEIRRAQIAACSYADGDPEVAGRLLAMLGLLPVAEPEPEPEPVKREPERRPVLRWAAWMDDAACAGDDPELWHPDRDSDPAADARITCLSCPVRDKCGEHAAKNAEPHGVWGGYRMYEPTEKNALRRKHGLVVRERKTKQVMCACGTRLVSPNKRVCGPCREGYTHSRPAHEHLKKLKAAGMTRAEVAAAAGIPVGTVRSILAHEYDSMRAKVSDAILAIPVPEEAER GT:EXON 1|1-244:0| SEG 48->68|pvaepepepepvkreperrpv| SEG 90->101|pdrdsdpaadar| RP:PDB:NREP 1 RP:PDB:REP 190->240|3bd1B|8e-05|10.0|50/63| RP:PFM:NREP 1 RP:PFM:REP 74->129|PF02467|1e-06|44.6|56/66|Whib| HM:PFM:NREP 2 HM:PFM:REP 74->132|PF02467|3.6e-18|44.1|59/66|Whib| HM:PFM:REP 191->217|PF01381|1.4e-05|25.9|27/55|HTH_3| RP:SCP:NREP 1 RP:SCP:REP 188->236|1b0nA2|4e-04|20.4|49/68|a.35.1.3| OP:NHOMO 1 OP:NHOMOORG 1 OP:PATTERN -------------------------------------------------------------------- ------------------------------------1-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 53 STR:RPRED 21.7 SQ:SECSTR ###########################################################################################################################################################################################cHHHHHHHHHccHHHHHHHHTccHHHHHHHHHHTcccGGHHHHHH#TTTcccHH### DISOP:02AL 1-2, 55-58, 61-62, 241-244| PSIPRED ccccEEcccccccccHHHHHHHHHcccccccccccccccccHHHHccccccccccHHHcccccccccccccHHHHHHcccccccccEEEccccccHHHHHHHHHcccccHHHHHHHHHHcccccEEEcccccccHHHHHHHHHccccEEccccccccccccccEEccccHHHcccccccccccccHHHHHHHHHHHccHHHHHHHHccccHHHHHHHHHHHHHHHHHHHcccEEEEcccHHccc //