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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56370.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  4/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
b.86.1
:643 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   215->289 2cw8A PDBj 2e-09 24.6 %
:RPS:SCOP  202->277 1dq3A1  b.86.1.2 * 1e-08 19.7 %
:HMM:SCOP  198->301 1at0A_ b.86.1.1 * 5.4e-12 33.7 %
:BLT:SWISS 214->260 Y682_METJA 1e-05 38.3 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56370.1 GT:GENE BAD56370.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 1681779..1683710 GB:FROM 1681779 GB:TO 1683710 GB:DIRECTION + GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD56370.1 LENGTH 643 SQ:AASEQ MAGLTTRLMDLESAALFDRLQRQAAVDAIEEIAKRWATSPPNDFGVWFDRNIARLTRAVEAGQSAAVRDVERYVDDALDEQNIRAPKVATPTHERLVGVTADGRTIEGLLAQTVIGARAAMAEGVPAYKAWQDAGYEARRVISNEIADAGRAATGVGIVSRLGVGYVRMLVPPSCSRCVILAGRYYHWSRGFRRHPNCFPAGTVVSGPSAEAATRRWFEGELVVFTTASGKQLSLTGNHPVLTRGGWVPANLLNEGDEVVRSTRPQGATPLVVPDHHQVPALIEDVWGSFAVNGLHRVPAAPEDFHGDGQRGEVDIVGPDRTLWCGHDAAIAQQREQQFFTRRTESSGLLVAESVAQLVDLWQAPHSGSSIGRSGLPFALIGGHGGGPVERGLTVAAGGYPGLHEALADYRPGDAVLPPQGVFAGSSEIGGDDCVIGKVDSTRWDAPALPFLVEGRAGYASRGKELFDRLTGQVELDRIVILRRVQWSGHVFSLTSSEGWHTANSLIVSNCNCRHIPSREDRADEITTDPKKYFESLSEADQNKTFGQAGAQAIRDGADMSQVVNARRGLTIIGGRAQRSEVYGRRLLTTTEGVTRRGQAGRAMRARGRNARTTPRLMPEAIYEIAETRAEAIELLRKYGYVA GT:EXON 1|1-643:0| BL:SWS:NREP 1 BL:SWS:REP 214->260|Y682_METJA|1e-05|38.3|47/100| SEG 333->345|qqreqqfftrrte| SEG 595->614|trrgqagramrargrnartt| RP:PDB:NREP 1 RP:PDB:REP 215->289|2cw8A|2e-09|24.6|69/528| RP:SCP:NREP 1 RP:SCP:REP 202->277|1dq3A1|1e-08|19.7|76/168|b.86.1.2| HM:SCP:REP 198->301|1at0A_|5.4e-12|33.7|101/145|b.86.1.1|1/1|Hedgehog/intein (Hint) domain| OP:NHOMO 5 OP:NHOMOORG 4 OP:PATTERN -------------------------------------------------------------------- -----1------------------------------1---------------------------2--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 105 STR:RPRED 16.3 SQ:SECSTR ####################################################################################################################################################################################################################EEEEEEEEEEEEEEETTccEEEEETTcEEEEEETEEETTTccTTcEEEGGccccEEccccccccccEEEHHHHHHTcEEEETTcEEEEEEEccEEEEEcccEEEE###################################################################################################################################################################################################################################################################################################################################### DISOP:02AL 1-3, 524-525, 601-611| PSIPRED cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccEEcccHHHHHHHHHcccHHHHHHHHHHHHHHcccccccccccccccHHHEEEEEccccHHHHHHHHHHHHHHHHHHccccHHHHHHHccHHHHHHHHHHHHHcccHHHHHHHHHHHcHHEEEEEcccccccEEEEEccEEHHcccccccccccccccccccccccHHHEEccccEEEEEEEccccEEEEEccccEEcccccEEccccccccEEEEcccccccccEEEcccccccHHHHHHHHHHHHccEEEccccccccccccccccEEEEcccEEEHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHcccccccHHHHHcccEEEEEccccccHHHHHHHHHccccccccccccccccEEEccccccEEEHHHcccccEEEccccccccccccHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHEEEEEEEccEEEEEccccEEEEEcEEEEEccEEEEEcccHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHcccHHHHHHHHHccEEEEccccHHHHHHHHHHEEEcHHHHHcccccHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHccccc //