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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56373.1
DDBJ      :             putative phage protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  15/915 : Eukaryota  0/199 : Viruses  4/175   --->[See Alignment]
:342 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   32->302 3bqwA PDBj 3e-10 15.0 %
:RPS:PFM   12->329 PF03864 * Phage_cap_E 7e-10 26.9 %
:HMM:PFM   92->296 PF03864 * Phage_cap_E 7e-12 21.7 203/345  
:BLT:SWISS 31->181 SYI_AZOSE 5e-05 22.0 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56373.1 GT:GENE BAD56373.1 GT:PRODUCT putative phage protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 1684722..1685750 GB:FROM 1684722 GB:TO 1685750 GB:DIRECTION + GB:PRODUCT putative phage protein GB:PROTEIN_ID BAD56373.1 LENGTH 342 SQ:AASEQ MVALVINSDYVTPAELTGYVREALADQPINDLSLVDQLLPDTMIDDIEFRANITQHGLRRAGQFRAYDTEAPISGRRGIERISGELPPLSEKRLLGEYDRLRMRKVPDAIRNVIFNDAVELAQALRTRMVLAKADAIVNGEVALEENGLELKVEFKRAPGHTVTAATLWNVTGAGAADPILDQESWFSTFRVTQSGNPVRAITSQRVMSALMRNDKIRAHALPVGSTQGIVTREAVNALFTSFGHPPFEIFDAQVEDWEGNATRLIPDDVIVYVGAAKIGETLWGTTAEALEPQYGIDATEAPGIVVGSFITPDATQRWTKASGIGLPMLLNGNATMVAKVL GT:EXON 1|1-342:0| BL:SWS:NREP 1 BL:SWS:REP 31->181|SYI_AZOSE|5e-05|22.0|150/100| RP:PDB:NREP 1 RP:PDB:REP 32->302|3bqwA|3e-10|15.0|267/347| RP:PFM:NREP 1 RP:PFM:REP 12->329|PF03864|7e-10|26.9|290/334|Phage_cap_E| HM:PFM:NREP 1 HM:PFM:REP 92->296|PF03864|7e-12|21.7|203/345|Phage_cap_E| OP:NHOMO 19 OP:NHOMOORG 19 OP:PATTERN -------------------------------------------------------------------- ------------1-----------1-----------1--------------------------------------1----------------------------------------------------------------------------------------------------------------------------------------------------1------------------------------1-11----1--------------------1---------------11----1---1-1-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------1---------------------1------1--------------------------1----------------- STR:NPRED 267 STR:RPRED 78.1 SQ:SECSTR ###############################ccccHHHHcccHHHHHHccEEEEcccccEEGGGcccTTcEEEETGGcEEEcEEcccccccEEEccTTccccccccccGGGGGHHHHHHHHHHHHHHHHHHHHHHHHHHcEEEEccTTccEEEEccccGGGEEEGGGcGGGccTTTccTHHHHHHHHHTTccc####ccEEEEcHHHHHHHHTcHHHHHcccccccccHHTTcTTTEEEEEEETTEEEEEEccEEEcTTccEEEcccTTEEEEEcTTcccEEEEcccccHHHHHTTcccccc######################################## DISOP:02AL 342-343| PSIPRED ccEEEEccccccHHHHHHHHHHHHHccccccEEEHHHcccccccccEEEEEEEEccccEEEEEEEEcccccccHHHHHHHHccccccccccHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEcccccEEEEEccccccccccccEEEccccccccccHHHHHHHHHHHHHHccccccEEEEcHHHHHHHHccHHHHHHHcccccccccccHHHHHHHHHHcccEEEEEEccEEEEccccEEEEEEccEEEEEcccccccEEEcccHHHcccccccccccccEEEEccEEccccHHHEEEcccccccccccccEEEEEEEc //