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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56404.1
DDBJ      :             putative DNA-binding protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  6/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.35.1
:391 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   8->72 2axzA PDBj 1e-09 21.0 %
:RPS:SCOP  1->45 1y7yA1  a.35.1.3 * 5e-08 26.7 %
:HMM:SCOP  3->73 2bnmA1 a.35.1.3 * 1.9e-15 45.1 %
:HMM:PFM   12->66 PF01381 * HTH_3 1e-13 48.1 54/55  
:BLT:SWISS 8->70 RPC_BPPH1 8e-05 35.5 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56404.1 GT:GENE BAD56404.1 GT:PRODUCT putative DNA-binding protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(1705599..1706774) GB:FROM 1705599 GB:TO 1706774 GB:DIRECTION - GB:PRODUCT putative DNA-binding protein GB:PROTEIN_ID BAD56404.1 LENGTH 391 SQ:AASEQ MPDRTRDLGDRLASIRKRRSLTQAELAEAAGVSVSTVCKLEQHEYGTPRLATLRKLAAALGVPTSVLQGEHHGDAEPADTATLDLWEPVRHALAAPPEPDETDQPTATEVRAELRRLQGLMAAHRYTEMAAAAPALLRDSAAIGDRGLCSAALGMVGWLLVQNRQWDDAAVVLDQAVDAADDEILAAGAVTTRVWSEIRQGNLSDARTLAMSTADRIEPRFSRATVSALAIWGRLWLYVATIAARDNRQHEHDDALGLARAAASRIGGEVCTELATTRIFGPTSVEHLAAETAAITEQPGLALAIAERTPPATLLPTAAGRLRHRLDMANAHTQLGQWSEATGALMTVAQAAPQWLAQQRYARDIVAEMVQRRRTLTDEMRQLADTVRLEL GT:EXON 1|1-391:0| BL:SWS:NREP 1 BL:SWS:REP 8->70|RPC_BPPH1|8e-05|35.5|62/144| SEG 49->60|rlatlrklaaal| SEG 130->142|aaaapallrdsaa| SEG 167->182|ddaavvldqavdaadd| RP:PDB:NREP 1 RP:PDB:REP 8->72|2axzA|1e-09|21.0|62/300| HM:PFM:NREP 1 HM:PFM:REP 12->66|PF01381|1e-13|48.1|54/55|HTH_3| RP:SCP:NREP 1 RP:SCP:REP 1->45|1y7yA1|5e-08|26.7|45/69|a.35.1.3| HM:SCP:REP 3->73|2bnmA1|1.9e-15|45.1|71/0|a.35.1.3|1/1|lambda repressor-like DNA-binding domains| OP:NHOMO 9 OP:NHOMOORG 6 OP:PATTERN -------------------------------------------------------------------- ------------------------------------3----121-----------------1--1---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 104 STR:RPRED 26.6 SQ:SECSTR cccHHHcHHHHHHHHHHHTTccTHHHHTHTTTcHHHHHHHHTTccccccHHHHHHHHHHHcccHHHHHHHHTccccHHHHHHHHHHHHHHTTcccccccccccH############################################################################################################################################################################################################################################################################################### DISOP:02AL 1-3, 75-80, 220-226| PSIPRED cccHHHHHHHHHHHHHHHHcccHHHHHHHHcccHHHHHHHHccccccccHHHHHHHHHHHcccHHHHccccccccccHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHccccHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHcccccccccccHHHHHHHHHccHHHHcccHHHHHHHHHHHHHcccHHHHHcHHHHHHHHHHHHcccccHHHHHHHHHHHHccc //