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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56418.1
DDBJ      :             putative hydrolase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  19/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.69.1
:301 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   42->155 2e3jA PDBj 2e-08 33.3 %
:RPS:PDB   27->297 3e3aB PDBj 9e-21 18.4 %
:RPS:SCOP  30->291 1c4xA  c.69.1.10 * 6e-21 21.4 %
:HMM:SCOP  36->291 1mtzA_ c.69.1.7 * 4e-44 28.6 %
:RPS:PFM   122->269 PF00561 * Abhydrolase_1 1e-05 33.1 %
:HMM:PFM   79->290 PF00561 * Abhydrolase_1 5e-23 26.3 209/231  
:BLT:SWISS 30->291 PHAB_PSEOL 6e-08 28.9 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56418.1 GT:GENE BAD56418.1 GT:PRODUCT putative hydrolase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 1723658..1724563 GB:FROM 1723658 GB:TO 1724563 GB:DIRECTION + GB:PRODUCT putative hydrolase GB:PROTEIN_ID BAD56418.1 LENGTH 301 SQ:AASEQ MAGPDVRATRIHRLVRRAGVPDIAGVPGGREIELPGRGSTYVVDIPGPAGAPALILLHGTASTALLNWFPALEGLSERFRVILFDQRWHGRGIRSRTFRLDDCADDVVAVADALDVPRAVCVGYSLGGAVALTTAHRHPDRVAGLALCATPYRFREKWREKAFHQAFGALADVIAPLSLRRAEKLLHALAEVPEQQWAPGDFERWALAEFRSTSGWALTQVIAEVGRFDATPWLHTLDLPTAVVITTRDRAIPVYRQLEMATMIPGATIHLARTGHTGCVFGADRFVPAVLAACDSVADRL GT:EXON 1|1-301:0| BL:SWS:NREP 1 BL:SWS:REP 30->291|PHAB_PSEOL|6e-08|28.9|239/283| SEG 101->120|ddcaddvvavadaldvprav| BL:PDB:NREP 1 BL:PDB:REP 42->155|2e3jA|2e-08|33.3|111/346| RP:PDB:NREP 1 RP:PDB:REP 27->297|3e3aB|9e-21|18.4|266/275| RP:PFM:NREP 1 RP:PFM:REP 122->269|PF00561|1e-05|33.1|142/211|Abhydrolase_1| HM:PFM:NREP 1 HM:PFM:REP 79->290|PF00561|5e-23|26.3|209/231|Abhydrolase_1| RP:SCP:NREP 1 RP:SCP:REP 30->291|1c4xA|6e-21|21.4|257/281|c.69.1.10| HM:SCP:REP 36->291|1mtzA_|4e-44|28.6|255/290|c.69.1.7|1/1|alpha/beta-Hydrolases| OP:NHOMO 20 OP:NHOMOORG 19 OP:PATTERN -------------------------------------------------------------------- ---------------------1-----------1111-------------------------1-------------------1---------------------------------------------------------1---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---------------------------------------------------------1--1---------------------------------------------------------------------------------1--1---1-----------------------2---1--------------------------------------------------------------11-1---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 288 STR:RPRED 95.7 SQ:SECSTR ############GGTTcTTccGGGTcEccccTTccccEEEEEEEcccEEccccEEEEccTTccGGHGGTTTHHHHHTTEEEEEEccTTcGGGTTcccccHHHHHHHHHHHHHHTTcccEEEEEETHHHHHHHHHHHHcGGGEEEEEEEcccccccHHHHHHHHHHHHHHHTTccccHHHHHHHHHHHHccHHHHTcHHHHHHHHHHHHHccccccHHHHHHTTcccccccGGGGGGccccEEEEEETTcccccHHHHHHHHHHcTTEEEEETTccTTHHHHcHHHHHHHHHHHHHHcccc# DISOP:02AL 1-4| PSIPRED ccccccccccccHHHccccccccccccccEEEEEcccEEEEEEEEcccccccEEEEEccccccHHHHHHHHHHHHHcccEEEEEEccccccccccccccHHHHHHHHHHHHHHcccccEEEEEEcHHHHHHHHHHHHHHHHHcEEEEEcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHccccHHHHHHHHHHHccccHHHHHHHccccEEEEEccccccccHHHHHHHHHHccccEEEEEccccccHHccHHHHHHHHHHHHHHHHHcc //