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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56429.1
DDBJ      :             putative hydrolase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  152/915 : Eukaryota  30/199 : Viruses  0/175   --->[See Alignment]
c.69.1
:290 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   11->268 1ehyA PDBj 6e-13 29.2 %
:RPS:PDB   10->279 3e3aB PDBj 4e-30 19.2 %
:RPS:SCOP  10->280 1iunA  c.69.1.10 * 3e-32 23.9 %
:HMM:SCOP  2->281 1cv2A_ c.69.1.8 * 1.2e-60 37.8 %
:RPS:PFM   101->257 PF00561 * Abhydrolase_1 6e-07 39.6 %
:HMM:PFM   55->276 PF00561 * Abhydrolase_1 7.8e-26 24.8 218/231  
:HMM:PFM   15->39 PF06441 * EHN 0.0005 36.0 25/112  
:BLT:SWISS 10->254 DMPD_PSEUF 4e-15 31.3 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56429.1 GT:GENE BAD56429.1 GT:PRODUCT putative hydrolase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(1735401..1736273) GB:FROM 1735401 GB:TO 1736273 GB:DIRECTION - GB:PRODUCT putative hydrolase GB:PROTEIN_ID BAD56429.1 LENGTH 290 SQ:AASEQ MSSFLDNTVRETTVDGVRVAYVTAGRGEPLVLLHGWPEDHRAWSHQLAPLAAVRRVIAPDLPGWGASDRDVRLSHDYDSEVDRLARLLDALGLDRIDLACHDYGGFLGLGFLHRYPHRVRRFALLNSRAHGTFTWPYRLLFGAFTTLASHRATRRLLTVRAMYPLHRWGLRGYVRNGSFSPGLLDDYLSMLRTPEGLRWYAHFWAGYRVRVRPELAAGLAAVDCPTTVIWGRRDPAIPLRTARELASRIPGAHLVLLDADHFVMEQRPAEVTEALLAWLDRPVENTAAAN GT:EXON 1|1-290:0| BL:SWS:NREP 1 BL:SWS:REP 10->254|DMPD_PSEUF|4e-15|31.3|227/283| SEG 82->99|drlarlldalgldridla| BL:PDB:NREP 1 BL:PDB:REP 11->268|1ehyA|6e-13|29.2|250/282| RP:PDB:NREP 1 RP:PDB:REP 10->279|3e3aB|4e-30|19.2|260/275| RP:PFM:NREP 1 RP:PFM:REP 101->257|PF00561|6e-07|39.6|139/211|Abhydrolase_1| HM:PFM:NREP 2 HM:PFM:REP 55->276|PF00561|7.8e-26|24.8|218/231|Abhydrolase_1| HM:PFM:REP 15->39|PF06441|0.0005|36.0|25/112|EHN| RP:SCP:NREP 1 RP:SCP:REP 10->280|1iunA|3e-32|23.9|259/272|c.69.1.10| HM:SCP:REP 2->281|1cv2A_|1.2e-60|37.8|275/0|c.69.1.8|1/1|alpha/beta-Hydrolases| OP:NHOMO 272 OP:NHOMOORG 182 OP:PATTERN -------------------------------------------------------------------- ----4---------11-----1--14------111122321222----------1------31-324432-------------------------------1---3------------------------------133-----1114131112211--------211211------------111---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------2111------1-522----1-------------1-12122224-1--2---1-1--1--13-1------------------------------------------------------------1-----2222132-------11------32--1-1--23-1------1----2------------------13-1-------------1-1------1111-4-------------------------------------1-1-111111111111111111----1------------------------------------------------1--------------------1-------------------------11111------11--------------------------------2---11121-1-1-------------1-----------1--1-1----------------------------------------------------------------1- -----------------1---1-1-1---------------------112------1-1------------------------------------------------1---21222-1---1-111----------1---1-12-----1--1---------------------1-------------1---1---3-- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 285 STR:RPRED 98.3 SQ:SECSTR cccccccccccTTccccEEEEEEEcccEEEEEEccTTccGGGGTTTHHHHHTTEEEEEEccTTcGGGTTcccccccHHHHHHHHHHHHHHTTcccEEEEEETHHHHHHHHHHHHcGGGEEEEEEEcccccccHHHHccHHHHHHHHHHHHHHHHTTccccHHHHHHHHHHHHccHHHHTcHHHHHHHHHHHHHccHccccHHHHHHTTcccccccGGGGGGccccEEEEEETTcccccHHHHHHHHHHcTTEEEEEETccTTHHHHcHHHHHHHHHHHHGGcHHH##### DISOP:02AL 1-3, 281-290| PSIPRED ccccccccEEEEEEccEEEEEEEEccccEEEEEccccccHHHHHHHHHHHHcccEEEEEcccccccccccccccccHHHHHHHHHHHHHHHccccEEEEEEcHHHHHHHHHHHHcHHHHcEEEEEcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHcccHHHHHHHHHHHHHHHccccHHHHHHHccccEEEEEccccccccHHHHHHHHHHccccEEEEEccccccHHccHHHHHHHHHHHHHHHcccccccc //