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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56432.1
DDBJ      :             putative cytochrome d ubiquinol oxidase subunit I
Swiss-Prot:             

Homologs  Archaea  14/68 : Bacteria  611/915 : Eukaryota  2/199 : Viruses  0/175   --->[See Alignment]
:464 amino acids
:PSIPRED
:DISOPRED
:RPS:PFM   17->436 PF01654 * Bac_Ubq_Cox 2e-46 31.7 %
:HMM:PFM   17->436 PF01654 * Bac_Ubq_Cox 6e-115 34.7 418/436  
:BLT:SWISS 14->443 CYDA_BACSU 8e-38 26.4 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56432.1 GT:GENE BAD56432.1 GT:PRODUCT putative cytochrome d ubiquinol oxidase subunit I GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 1737823..1739217 GB:FROM 1737823 GB:TO 1739217 GB:DIRECTION + GB:PRODUCT putative cytochrome d ubiquinol oxidase subunit I GB:PROTEIN_ID BAD56432.1 LENGTH 464 SQ:AASEQ MWGVLAAGEGPPGLLPARQQMAFSLGWHIVLACFGVAFPAMIFVVHRRGIVRGDAVALGLAKRWATVSAILFAIGAVSGTVLSFEMGLLWPGLMGRYGDVLGLPFAFEGLSFFVEAIFLGIYLYGWGRMPPRRHLLMLVPMAVAGVVGTFCVVSVNAWMNNPTGFRLVDGEVTDVNPWRAMFNDAAFLQFAHMWVGAFMVVGFVVAGVYAAGMLRGRRDEHHRLGFTVPFVFATVAALAQPLIGHVLGMRVHDSQPAKLAAFELATTTEGPAPLRLGGLLIDGEVRGALEIPRLGSIIARNSLTAPIPGLDTVPADEHPPVNITHLAFQTMVAVGTALALLVVVFWVLRWRRRDLLTHRWFLRVAVVAGPLAVLALECGWIATEVGRQPWTVWQVLTTRDAASTSEGLWWSFTIVLLVYLGMTVGAVAVLRSMARRWRAGAVHIAAPYGPGAAPVDEAERAGRP GT:EXON 1|1-464:0| BL:SWS:NREP 1 BL:SWS:REP 14->443|CYDA_BACSU|8e-38|26.4|425/468| TM:NTM 9 TM:REGION 25->46| TM:REGION 69->91| TM:REGION 102->124| TM:REGION 135->156| TM:REGION 187->209| TM:REGION 227->249| TM:REGION 328->349| TM:REGION 360->382| TM:REGION 410->432| SEG 195->213|vgafmvvgfvvagvyaagm| SEG 332->356|vavgtalallvvvfwvlrwrrrdll| SEG 362->376|lrvavvagplavlal| RP:PFM:NREP 1 RP:PFM:REP 17->436|PF01654|2e-46|31.7|419/432|Bac_Ubq_Cox| HM:PFM:NREP 1 HM:PFM:REP 17->436|PF01654|6e-115|34.7|418/436|Bac_Ubq_Cox| GO:PFM:NREP 3 GO:PFM GO:0016020|"GO:membrane"|PF01654|IPR002585| GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF01654|IPR002585| GO:PFM GO:0055114|"GO:oxidation reduction"|PF01654|IPR002585| OP:NHOMO 966 OP:NHOMOORG 627 OP:PATTERN -----1----------2--1-----421-1--------------------11-----1---2221--- 11111-11111--111111-11--1211111-11112111111111111111111-11--11111122112---------11-11-111111-111----11-1-1-1-111111111111111111-11-11-11--------2-1111---1111-------11141---------------1------12233333333233333312222233312111111111112-111111111111111111111-1-22-11-1111122-1-1111111111---------------------------------------1----------------------------2--1-11-1----11--------111111-----122111-11113111111111111-33234133211-3111-111111131-1-11111111--2222222221111-31------------11111111111111-1---12-1333233332333222255533333124542222-1112-1---11111-11--2-211----------12--1211111121111121211111122221113111-111111--1--------111-11221311211121222211121221111211--1-11-------23122322222222222-2222222222222222222332223233333333333333232222222221-211111111111---12222122221111311111111111111122222121112111212222112112111211112121-111133333122112234344323-------------------------------------------------------------11 -------------------------------------------------------------------------------------------------------------------------------------------------------------------1----------1------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 440-464| PSIPRED ccEEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccEEEccEEEEccHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHccccccccccEEEEEEEccccEEEEEEcccHHcEEEccccccEEcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEHHccEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccHHHcccc //