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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56450.1
DDBJ      :             putative dehydrogenase
Swiss-Prot:             

Homologs  Archaea  39/68 : Bacteria  671/915 : Eukaryota  185/199 : Viruses  0/175   --->[See Alignment]
b.35.1c.2.1c.30.1
:376 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   1->371 1ee2A PDBj 4e-59 36.2 %
:RPS:PDB   1->371 1a71A PDBj 2e-53 31.4 %
:RPS:SCOP  1->195 1f8fA1  b.35.1.2 * 1e-29 27.8 %
:RPS:SCOP  182->286 1a9xA3  c.30.1.1 * 5e-12 17.6 %
:HMM:SCOP  1->194 1dehA1 b.35.1.2 * 4.6e-60 39.6 %
:HMM:SCOP  159->338 1d1tA2 c.2.1.1 * 8.6e-35 32.9 %
:HMM:SCOP  321->371 1e3iA1 b.35.1.2 * 8.5e-11 39.2 %
:RPS:PFM   27->107 PF08240 * ADH_N 5e-15 47.5 %
:RPS:PFM   198->326 PF00107 * ADH_zinc_N 6e-07 31.4 %
:HMM:PFM   28->156 PF08240 * ADH_N 9.2e-28 37.4 107/109  
:HMM:PFM   198->329 PF00107 * ADH_zinc_N 1.3e-19 31.5 127/130  
:BLT:SWISS 1->375 ADHB_MYCTU e-144 62.3 %
:PROS 61->75|PS00059|ADH_ZINC

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56450.1 GT:GENE BAD56450.1 GT:PRODUCT putative dehydrogenase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 1756095..1757225 GB:FROM 1756095 GB:TO 1757225 GB:DIRECTION + GB:PRODUCT putative dehydrogenase GB:PROTEIN_ID BAD56450.1 LENGTH 376 SQ:AASEQ MKTKGAILWGIDQPWSVEEIEIGDPVAGEVQIRMETAGMCHSDHHIVTGATPMPGYPVMGGHEGAGVITKLGPNVPADLQVGDHVILSFIPACGRCPACVAGHMALCDLGAGLLMGQAISDGTYRIQARGENVIPMCLLGTFAPYMTVHHTSVVKIDPSIPFEVACLVGCGVPTGFGSATHVANVMPGETVVIAGIGGVGMSALQGAVLSGASKVVAIDPVPWKREQAQKFGATHTYASMAEAIMPLMEITEGRMAEKVILTMGEMHGDYVEEGLILTSKAGTLVVTSMGRMDEGTVKMNSFLLSMLQKTVKGCIFGGGNARQDAPRLLALYKAGQLNLDDMVTRSYSLEEINQGYQDMLDGKNLRGIIRYTEADW GT:EXON 1|1-376:0| BL:SWS:NREP 1 BL:SWS:REP 1->375|ADHB_MYCTU|e-144|62.3|374/375| PROS 61->75|PS00059|ADH_ZINC|PDOC00058| BL:PDB:NREP 1 BL:PDB:REP 1->371|1ee2A|4e-59|36.2|365/373| RP:PDB:NREP 1 RP:PDB:REP 1->371|1a71A|2e-53|31.4|366/374| RP:PFM:NREP 2 RP:PFM:REP 27->107|PF08240|5e-15|47.5|80/108|ADH_N| RP:PFM:REP 198->326|PF00107|6e-07|31.4|121/128|ADH_zinc_N| HM:PFM:NREP 2 HM:PFM:REP 28->156|PF08240|9.2e-28|37.4|107/109|ADH_N| HM:PFM:REP 198->329|PF00107|1.3e-19|31.5|127/130|ADH_zinc_N| GO:PFM:NREP 4 GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF08240|IPR013154| GO:PFM GO:0008270|"GO:zinc ion binding"|PF00107|IPR013149| GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF00107|IPR013149| GO:PFM GO:0055114|"GO:oxidation reduction"|PF00107|IPR013149| RP:SCP:NREP 2 RP:SCP:REP 1->195|1f8fA1|1e-29|27.8|187/188|b.35.1.2| RP:SCP:REP 182->286|1a9xA3|5e-12|17.6|102/127|c.30.1.1| HM:SCP:REP 1->194|1dehA1|4.6e-60|39.6|192/0|b.35.1.2|1/1|GroES-like| HM:SCP:REP 159->338|1d1tA2|8.6e-35|32.9|173/0|c.2.1.1|1/1|NAD(P)-binding Rossmann-fold domains| HM:SCP:REP 321->371|1e3iA1|8.5e-11|39.2|51/227|b.35.1.2|2/2|GroES-like| OP:NHOMO 3868 OP:NHOMOORG 895 OP:PATTERN 111---14777868A61424131-6----231-1----------11--------1112111321--22 446-931644711268766-6A22CO666667BABADGKK-84882441312A7C634112283A3DC8A5-111---1---9-11----11-1-----1---2-41131--------------------------13321---273128112--11---12-12-355721----1------3332232-628333333442454334A44455333331161222222234-33333323433334134341-4--2-5--11144212112232222221222322333323234342221222221222322111222-2---2221222222153--1-----11-1-1--1-2-3121-12221--35345444-----6478C5145424533333332222-64337446347-7AA5AA97878B352516344344534222222222654-112------------------------------2963212223B8867B96466888C7777265984655--33A23233443144321-2--31223223221442131----1---1----333-1-12-326455121----111111---1----------33221334317512222223232222322222---32--------25341238667877789-698878687868888888565535231648366866875653595435546--244443444444---2111111---113662223-2-1221-11-22324-42316154762833446434323211212111-1222-----2311134654552331------4111111--------1--------31--1-------21-----1--1-121-1142 ----112-----132GJDACDKDIJGD5534345647876466964BB7B9DPK9B86535414514243242335734612232363-9F8J4849584636836-451B5747845325583785I3Hj9-B7G844442263434-329384A27C58414231125267-22222G111219ESRBFI32GCAA2 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 375 STR:RPRED 99.7 SQ:SECSTR EEEEEEEcccTTcccEEEEEEEccccTTEEEEEEEEEEccHHHHHHHHTccccccccccccccEEEEEEEEcTTccccccTTcEEEEcccccccccHHHHcccccccTTccccccccccTTccccEEETTEEEcccTTTcccccEEEEEGGGEEEccTTccHHHHGGGGTHHHHHHHHHHTTTcccTTcEEEEEcccHHHHHHHHHHHHTTccEEEEEcccGGGHHHHHHHTccEEGGGccccHHHHHHHHTTccccEEEEcccccHcHHHHHHHHHHccTTTcEEEEcccccTTccccccTHHHHTTcEEEEccGGGccHHHHHHHHHHHHHTTccccGGGEEEEEEGGGHHHHHHHHHTTcccEEEEEcTccc# PSIPRED ccEEEEEEEcccccEEEEEEEcccccccEEEEEEEEEEEccccEEEEEcccccccccEEccccccEEEEEEccccccccccccEEEEcccccccccHHHcccccccccccccccccccccccccccccccccccccccccccEEEEEEcHHHEEEccccccHHHHHccccHHHHHHHHHHHHcccccccEEEEEcccHHHHHHHHHHHHccccEEEEEEccHHHHHHHHHHcccEEEcccccHHHHHHHHHccccccEEEEccccccHHHHHHHHHHHccccEEEEEEccccccccEEccHHHHHHcccEEEEEEEcccccHHHHHHHHHHHHcccccccEEEEEEEEHHHHHHHHHHHHccccEEEEEEEccccc //