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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56451.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  48/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
e.3.1
:272 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   33->266 3i7jB PDBj 3e-76 61.0 %
:RPS:PDB   32->263 2efuF PDBj 2e-25 24.5 %
:RPS:SCOP  34->265 1ci8A  e.3.1.1 * 2e-26 28.4 %
:HMM:SCOP  11->265 1ci9A_ e.3.1.1 * 1.3e-52 37.4 %
:RPS:PFM   32->247 PF00144 * Beta-lactamase 8e-18 40.4 %
:HMM:PFM   16->248 PF00144 * Beta-lactamase 8.3e-37 33.3 219/329  
:BLT:SWISS 92->234 YFEW_ECOLI 2e-07 35.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56451.1 GT:GENE BAD56451.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 1757315..1758133 GB:FROM 1757315 GB:TO 1758133 GB:DIRECTION + GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD56451.1 LENGTH 272 SQ:AASEQ MRALEQIQDWPVRHAAAGVVSAAGSSVQGAAERVFPLASVTKPLVAYAALVAVEEGAIELDQPAGPPGATVRHLLAHASGIAFDTTDVIAAPGTRRIYSSAGFDVLADFITEQTGIPFPDYLRESVFEPLGMTATALTGPAGHGARSSVDDLVCFAAELLRPRLISPQTHAEAVTVQFPGLNGVLPGYGSQRPNDWGLGFEIRARKSPHWTGTTNSERTFGHFGQSGTFLWIDPEYGLACCALADENFGDWAREVWPVLSDAVIAESNTLTR GT:EXON 1|1-272:0| BL:SWS:NREP 1 BL:SWS:REP 92->234|YFEW_ECOLI|2e-07|35.0|140/434| SEG 15->31|aaagvvsaagssvqgaa| SEG 44->57|lvayaalvaveega| BL:PDB:NREP 1 BL:PDB:REP 33->266|3i7jB|3e-76|61.0|231/268| RP:PDB:NREP 1 RP:PDB:REP 32->263|2efuF|2e-25|24.5|220/330| RP:PFM:NREP 1 RP:PFM:REP 32->247|PF00144|8e-18|40.4|203/324|Beta-lactamase| HM:PFM:NREP 1 HM:PFM:REP 16->248|PF00144|8.3e-37|33.3|219/329|Beta-lactamase| RP:SCP:NREP 1 RP:SCP:REP 34->265|1ci8A|2e-26|28.4|225/377|e.3.1.1| HM:SCP:REP 11->265|1ci9A_|1.3e-52|37.4|246/0|e.3.1.1|1/1|beta-lactamase/transpeptidase-like| OP:NHOMO 49 OP:NHOMOORG 48 OP:PATTERN -------------------------------------------------------------------- -----11111111111111-111111111111111111111111-12-1---------------11-111---------------------------------------------------------------------11------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 272 STR:RPRED 100.0 SQ:SECSTR cHHHHHHHHHTcEEEEEEEETTTccEEEEcTTccEEcGGGHHHHHHHHHHHHHHHTcccTTccTTGGGccGGGGTTTcccccccHHcccccTTccccccHHHHHHHHHHHHHHHcccHHHHHHHHTTTTTTcTTcEEGTGGGTcEEEcHHHHHHHHHHHHTTccccHHHHHHHHTccEEcccTTccccTTccEEEEccccEEEEETTEEEEEEEEEEEEEEEETTEEEEEEEcTTTccEEEEEEcEEcccTTcHHHHTTHHHHHHTHHHHcc DISOP:02AL 272-273| PSIPRED ccEEEEEEccEEEEEEEEEEEccccccccccccEEEEHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHccccccccccccccccccccEEcccHHHHHHHHHHHHHcccHHHHHHHHHHHHccccccEEcccccccccccHHHHHHHHHHHcccccccHHHHHHHHHHccccccccccccccccccccEEEEEEcccccccccccccccccEEEcccccEEEEEEEcccEEEEEEEccccccHHHHHHHHHHHHHHHHHHHHcc //