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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56454.1
DDBJ      :             putative hydrolase
Swiss-Prot:             

Homologs  Archaea  2/68 : Bacteria  139/915 : Eukaryota  29/199 : Viruses  0/175   --->[See Alignment]
c.69.1
:277 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   10->263 1vj5A PDBj 7e-13 28.7 %
:RPS:PDB   22->262 3e3aB PDBj 5e-26 22.6 %
:RPS:SCOP  4->263 1iunA  c.69.1.10 * 2e-24 20.4 %
:HMM:SCOP  6->262 1mtzA_ c.69.1.7 * 3.4e-47 32.5 %
:RPS:PFM   27->65 PF12146 * Hydrolase_4 8e-05 43.6 %
:RPS:PFM   53->164 PF00561 * Abhydrolase_1 7e-11 40.0 %
:HMM:PFM   52->127 PF00561 * Abhydrolase_1 4.6e-19 40.0 75/231  
:BLT:SWISS 10->269 HYES_HUMAN 1e-12 28.4 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56454.1 GT:GENE BAD56454.1 GT:PRODUCT putative hydrolase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(1759455..1760288) GB:FROM 1759455 GB:TO 1760288 GB:DIRECTION - GB:PRODUCT putative hydrolase GB:PROTEIN_ID BAD56454.1 LENGTH 277 SQ:AASEQ MVKLARRLTRPGAEIAFADFGGDGSSVVLIHGAGVDHSMFDEQVPVLTQRGYRVIVWDLRGHGQSALSPGERFTASDALEDLDALLAECGVDAPVLVGHSLGGNLAQAFARKFPQRVGGVIVLDSTWNAGPLSALERFALRLAAPGLAVIPAGRLPRIMARASATTPEAMARTEALFTRIPKRTFLDVWRATASFVAPEPGYRSPVPLALVRGAEDRTGNIATAMPRWADAEGLVEHVIPGAGHMVTMDAPAETSRLLVSILDGWDQRPAASERRSR GT:EXON 1|1-277:0| BL:SWS:NREP 1 BL:SWS:REP 10->269|HYES_HUMAN|1e-12|28.4|257/555| SEG 77->88|daledldallae| BL:PDB:NREP 1 BL:PDB:REP 10->263|1vj5A|7e-13|28.7|251/547| RP:PDB:NREP 1 RP:PDB:REP 22->262|3e3aB|5e-26|22.6|239/275| RP:PFM:NREP 2 RP:PFM:REP 27->65|PF12146|8e-05|43.6|39/79|Hydrolase_4| RP:PFM:REP 53->164|PF00561|7e-11|40.0|110/211|Abhydrolase_1| HM:PFM:NREP 1 HM:PFM:REP 52->127|PF00561|4.6e-19|40.0|75/231|Abhydrolase_1| RP:SCP:NREP 1 RP:SCP:REP 4->263|1iunA|2e-24|20.4|255/272|c.69.1.10| HM:SCP:REP 6->262|1mtzA_|3.4e-47|32.5|255/290|c.69.1.7|1/1|alpha/beta-Hydrolases| OP:NHOMO 271 OP:NHOMOORG 170 OP:PATTERN ------1-----------------------------------------------------------1- ---------------21----2--11-----133333976-122-1------1--1----121---44------------111-------------------1----1-----------------11----------1111---11-----------------------1-------------122-----------------------12---------1----------22-------------------------1---------11----------------------------------------------------1-1-1------------1-----------1-------1-------------1---11------1-3--2-----1-------1---1-1--1-2---2-----2-1--11--2---1---1-1-111--------------11------------------------------1-5-------1112111----112211--1-2231132--1-1--11-1--11------------------------1--------1----1-1-1-------16--2---------------------------11------1-------------------------1------------1----------------------------------------------------------------------------------------------1--------------------------------212122122-111---------------------1--------------------------------------------------------------------------- ---------------1------1-----------------------------11--1--------------------------------12----1------11----------------11-1---112C1-125--11-1-12-----1----1-----------------------4------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 271 STR:RPRED 97.8 SQ:SECSTR #EEEEEccccEEEccEEEEcccccEEEEEEccTTccGGGGTTHHHHHHHTTEEEEEEccTTcGGGTTcccGGccHHHHHHHHHHHHHHTTcccEEEEEETHHHHHHHHHHHHcGGGEEEEEEEcccccccHHHHHHHHHHHHHHHTTccccHHHHHHHccHHHHTcHHHHHHHHHHHHHccccccHHHHHHTTccccccGGGGGccccEEEEEETTcccccHHHHHHHHHHTTEEEEEETTccTTHHHHcHHHHHHHHHHHHHGGHTTccEE##### DISOP:02AL 1-3, 270-277| PSIPRED cccccEEEEEccEEEEEEEEcccccEEEEEccccccHHHHHHHHHHHHHcccEEEEEcccccccccccccccccHHHHHHHHHHHHHHHccccEEEEEEcHHHHHHHHHHHHcHHHHcEEEEEccccccccHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHcccHHHHHHHHHHHHHcccHHHHHHccccEEEEEccccccccHHHHHHHHHHccccEEEEEcccccccHHccHHHHHHHHHHHHHHHcccHHHHHHHcc //