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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56464.1
DDBJ      :             putative acyl-CoA carboxylase
Swiss-Prot:             

Homologs  Archaea  31/68 : Bacteria  452/915 : Eukaryota  158/199 : Viruses  0/175   --->[See Alignment]
c.14.1
:477 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   42->477 1x0uA PDBj 4e-79 37.9 %
:RPS:PDB   15->458 2a7sA PDBj 9e-39 36.9 %
:RPS:SCOP  22->213 1on3A1  c.14.1.4 * 9e-49 37.0 %
:RPS:SCOP  230->476 1on3A2  c.14.1.4 * 4e-43 37.8 %
:HMM:SCOP  17->211 1od2A2 c.14.1.4 * 8e-53 38.3 %
:HMM:SCOP  217->464 1od2A2 c.14.1.4 * 4.8e-77 40.6 %
:RPS:PFM   42->458 PF01039 * Carboxyl_trans 1e-68 39.6 %
:HMM:PFM   40->470 PF01039 * Carboxyl_trans 2.1e-148 43.6 427/493  
:BLT:SWISS 1->477 PCCB_RHOER e-169 67.4 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56464.1 GT:GENE BAD56464.1 GT:PRODUCT putative acyl-CoA carboxylase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 1770181..1771614 GB:FROM 1770181 GB:TO 1771614 GB:DIRECTION + GB:PRODUCT putative acyl-CoA carboxylase GB:PROTEIN_ID BAD56464.1 LENGTH 477 SQ:AASEQ MTIMAPAFQPETATDPRDPMGRLQRFFDPGTVLPLHPRDKSGVLAAIGEVDGVRTVAYCSDATVMGGAMGVEGCKHIVDAIDTAIDSGVPVVGLWHSGGARLAEGVEALHAVGLVFEAMVRASGRVPQISVVLGFAAGGAAYGPALTDIVIMAPEGRVFVTGPDVVRSVTGEQVDMATLGGPETHGKKSGVCHIVADDEADAMHRARKLVSMFAEQGEFDLVAAEHGNVDLQAMLPDSPKRAYDVKPIVHELLDNVDGESSFEELQGGYARSMVVGLGRLGGRTVGVLANNPLRLGGCLNSESAEKASRFVRLCDAFGIPLIVITDVPGYLPGVGQEWEGVVRRGAKLLHAFAEARVPRVTLVTRKIYGGAYIAMNARSLGATAVYAWPGSEVAVMGAKAAVGILHKKALAAAPEEEREALHERLTAEHEKIAGGVDRALAIGVVDEVIDPAKTRSVIAAALAAAPARPSHHKNIPL GT:EXON 1|1-477:0| BL:SWS:NREP 1 BL:SWS:REP 1->477|PCCB_RHOER|e-169|67.4|476/476| SEG 134->145|gfaaggaaygpa| SEG 274->288|vvglgrlggrtvgvl| SEG 405->428|lhkkalaaapeeerealherltae| SEG 459->467|aaalaaapa| BL:PDB:NREP 1 BL:PDB:REP 42->477|1x0uA|4e-79|37.9|430/518| RP:PDB:NREP 1 RP:PDB:REP 15->458|2a7sA|9e-39|36.9|439/529| RP:PFM:NREP 1 RP:PFM:REP 42->458|PF01039|1e-68|39.6|402/454|Carboxyl_trans| HM:PFM:NREP 1 HM:PFM:REP 40->470|PF01039|2.1e-148|43.6|427/493|Carboxyl_trans| GO:PFM:NREP 1 GO:PFM GO:0016874|"GO:ligase activity"|PF01039|IPR000022| RP:SCP:NREP 2 RP:SCP:REP 22->213|1on3A1|9e-49|37.0|192/253|c.14.1.4| RP:SCP:REP 230->476|1on3A2|4e-43|37.8|241/264|c.14.1.4| HM:SCP:REP 17->211|1od2A2|8e-53|38.3|193/389|c.14.1.4|1/2|ClpP/crotonase| HM:SCP:REP 217->464|1od2A2|4.8e-77|40.6|244/389|c.14.1.4|2/2|ClpP/crotonase| OP:NHOMO 1363 OP:NHOMOORG 641 OP:PATTERN --1-1111111111111------132231-23----------------------1111111-----11 2344834433332277755-583378555555887876A826351223111122222211466233455531111111----2-----33331311---11112221222----------------1111-1112-344441112--------------------------------------22322--112211111111111111122222211123222--------2-------------------------------------------------------------------------------------------121------------1-------1-1--2111---1-1--111112112-2--5335-----1254422-5454422222211122-11311211234-222221222322223322222222224--------1----2431111111111--11111111111111111-3322-132121111111111111122222-211356541133122323424447--3----31----------2222923-----------2122212-233333311---------------------------11-12-1131-1111111111112111111---1---------------------------------------------------1-------------------------------------------1111112222-22-----------------222221-1111-33331322311111112-------------2-----12-111111111111------11221122------------------------------------1111111111-11 ----222-521-224222232212213222211111122222222221111131111111111--------------------------1212211111-113444-2425343332222222-44231HI2-334221222213221212124233333652532111132344211-----1111112112232223 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 477 STR:RPRED 100.0 SQ:SECSTR HHHHHHTHHHHHHHTccEEEcTTcccccccTTcTTcccTTTTEEEEEEEccccEEEEEEEcTTcGGGcccHHHHHHHHHHHHHHHHHTccEEEEEccccccGGGcTHHHHHHHHHHHHHHHHTTTccEEEEEccccccGGGHHHHHccEEEEEcTcccccccHHHHHHHHcccccHHHHHcHHHHHHTcccccEEEccHHHHHHHHHHHHHHccccTTcccccccccHHTTTTTccccccccccTHHHHHHHccGHHcccccEEEcTTccTTEEEEEEEccccEEEEEEEcTTTGGGcccHHHHHHHHHHHHHHHHTTccEEEEEEEccccccHHHHHHcHHHHHHHHHHHHHHccccEEEEEEEEEEHHHHHHTTcGGGTccEEEEcTTcEEEcccHHHHHHHHTTTTTTGGGTccccTTccTTHHHHHHHTTTccHHHHHTcccEEccGGGHHHHHHHHHHHHTTcccccccccc DISOP:02AL 413-415, 471-473| PSIPRED cccccHHHHHHHccccccHHHHHHHHcccccccccccccccEEEEEEEEEccEEEEEEEEccccccccccHHHHHHHHHHHHHHHHccccEEEEEcccccccHHHHHHHHHHHHHHHHHHHHHccccEEEEEEccccHHHHHHHHHccEEEEEcccEEEEEcHHHHHHHHccccccccccHHHHHHHHccccEEEEccHHHHHHHHHHHHHHcccccccccccccccccccEEEEEccccccccHHHHHHHHHccccccccHHHHccccccEEEEEEEEEccEEEEEEEEccHHHcccccHHHHHHHHHHHHHHHHccccEEEEEcccccccHHHHHHHHHHHHHHHHHHHHHHccccEEEEEccccccccccEEccccccccEEEEccccEEEEEcHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcccHHHHHHcccccccccHHHHHHHHHHHHHHHHHcccccccccc //