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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56471.1
DDBJ      :             putative L-alanine dehydrogenase
Swiss-Prot:             

Homologs  Archaea  7/68 : Bacteria  588/915 : Eukaryota  117/199 : Viruses  0/175   --->[See Alignment]
c.2.1c.23.12
:371 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   1->366 2vhwE PDBj e-113 59.0 %
:RPS:PDB   1->369 2eezA PDBj 5e-28 45.9 %
:RPS:SCOP  1->146 1pjbA2  c.23.12.2 * 1e-52 52.4 %
:RPS:SCOP  137->304 1pjbA1  c.2.1.4 * 3e-40 38.1 %
:RPS:SCOP  301->358 1pjbA2  c.23.12.2 * 3e-12 41.4 %
:HMM:SCOP  1->363 1pjcA2 c.23.12.2 * 1e-66 54.1 %
:RPS:PFM   4->137 PF05222 * AlaDh_PNT_N 6e-31 53.0 %
:RPS:PFM   218->296 PF01262 * AlaDh_PNT_C 3e-15 55.8 %
:HMM:PFM   4->137 PF05222 * AlaDh_PNT_N 6.1e-51 55.2 134/136  
:HMM:PFM   154->297 PF01262 * AlaDh_PNT_C 1e-50 50.0 144/168  
:BLT:SWISS 1->366 DHA_MYCTU e-112 59.0 %
:PROS 173->198|PS00837|ALADH_PNT_2
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56471.1 GT:GENE BAD56471.1 GT:PRODUCT putative L-alanine dehydrogenase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 1776507..1777622 GB:FROM 1776507 GB:TO 1777622 GB:DIRECTION + GB:PRODUCT putative L-alanine dehydrogenase GB:PROTEIN_ID BAD56471.1 LENGTH 371 SQ:AASEQ MRIGVPGEVKAQEFRVALTPAGAAELVRHGHEVLVERGAGAGSGFGDEAYRAAGARVVAEADEVWGEAELVLKVKEPIEPEYHRMRREQVLFAYLHLAASKECTEAILRSGITAIAYETVRAADGSLPLLAPMSEVAGKLAVQVGAYHLLAPLGGAGMLLGGVPGVRPAEVVVLGGGVAGGNAAAVAAGMGARVSVLDTDLVRLRALDARFQGRVSTIASNAAEVERAVLRADLVVGSVLVPGARAPKLVTQAMVAAMRPGSVLVDIAIDQGGCFEGSRPTTHANPTFYVANSLYYCVANMPGAVPHTATVALTNATLPYVLAIADLGWREACSARPDLAAGVTAEDGRLLSPQVAAAHGLGEARPMGLAG GT:EXON 1|1-371:0| BL:SWS:NREP 1 BL:SWS:REP 1->366|DHA_MYCTU|e-112|59.0|366/371| PROS 173->198|PS00837|ALADH_PNT_2|PDOC00654| SEG 149->166|llaplggagmllggvpgv| SEG 171->196|vvvlgggvaggnaaavaagmgarvsv| BL:PDB:NREP 1 BL:PDB:REP 1->366|2vhwE|e-113|59.0|366/373| RP:PDB:NREP 1 RP:PDB:REP 1->369|2eezA|5e-28|45.9|340/343| RP:PFM:NREP 2 RP:PFM:REP 4->137|PF05222|6e-31|53.0|134/136|AlaDh_PNT_N| RP:PFM:REP 218->296|PF01262|3e-15|55.8|77/164|AlaDh_PNT_C| HM:PFM:NREP 2 HM:PFM:REP 4->137|PF05222|6.1e-51|55.2|134/136|AlaDh_PNT_N| HM:PFM:REP 154->297|PF01262|1e-50|50.0|144/168|AlaDh_PNT_C| GO:PFM:NREP 4 GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF05222|IPR007886| GO:PFM GO:0055114|"GO:oxidation reduction"|PF05222|IPR007886| GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF01262|IPR007698| GO:PFM GO:0055114|"GO:oxidation reduction"|PF01262|IPR007698| RP:SCP:NREP 3 RP:SCP:REP 1->146|1pjbA2|1e-52|52.4|145/193|c.23.12.2| RP:SCP:REP 137->304|1pjbA1|3e-40|38.1|168/168|c.2.1.4| RP:SCP:REP 301->358|1pjbA2|3e-12|41.4|57/193|c.23.12.2| HM:SCP:REP 1->363|1pjcA2|1e-66|54.1|194/194|c.23.12.2|1/1|Formate/glycerate dehydrogenase catalytic domain-like| OP:NHOMO 1003 OP:NHOMOORG 712 OP:PATTERN -----------------------------1--------111111------------------------ 113211-------121122-221111111111122223331-1-1-112111324111--11233122111-111111----3-----1111-2-1---11211212221--------------122122112121---11----22232222111121222222212222-11-11-11---1112211-11122222222222222212221122322212111111111212222222222222211111--1-11------------11--1----------1---3-2--------------------1--11----------------------11-------1-1----11-11-111-111----1-22222-----1131111111111111111111-2-11111111231-311322532222113112222222222--------111--221------------1111-11---11-----12211-----2122221-----22421111-1311284-1211111-111122211121-1-1111--1-12221-111223111212112-11111111-12-11111-----------1-1111111-------221111211122222222222223122222---21-1------111111-1111111111-1111111111111111111111111111111111111111111111111111-111111111111---122222111121221111111111112111111111111-12111111112-1111-11----------22232222222222----------------2-----------------1----------------11-----------------12- --11-11--------11---1111-1111111111111111-111111111111111-1111---------------------------1111111---1-------11-225221311-11116211-252-1111111--12-111-11113111221141211--11-112--1218---2-----1--31----- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 369 STR:RPRED 99.5 SQ:SECSTR cEEEEcccccTTcccccccHHHHHHHHHTTcEEEEETTTTGGGTccHHHHHHHTcEEEcHHHEEHTTccEEEccccccGGGGGGccTTcEEEEcccGGGcHHHHHHHHHHTcEEEEGGGcccTTcccTTTHHHHHHHHHHHHHHHHHHTcGGGTcccccTTccTTccccEEEEEcccHHHHHHHHHHHHTTcEEEEEEccHHHHHHHHHHTTTcEEEEEccHHHHHHHHHHccEEEEccccTTccccccccHHHHTTccTTcEEEEccEEEETTcTTcccEEEEccccEETTEEEEcccccGGGcHHHHHHHHHHHHHHHHHHHHHHTTTHHHHccHHHHTTEEEETTEEccHHHHHHTTcccccHHHH## PSIPRED cEEEEEccccccccEEEccHHHHHHHHHcccEEEEEccccccccccHHHHHHcccEEEccHHHHHHcccEEEEEccccHHHHHHcccccEEEEEccccccHHHHHHHHHcccEEEEHHHcccccccccHHcccHHcccHHHHHHHHHHHHHHccccEEEEcccccccccEEEEEcccHHHHHHHHHHHHcccEEEEEEccHHHHHHHHHHcccEEEEEEccHHHHHHHHHHccEEEEccccccccccccccHHHHHHcccccEEEEEcccccccccccccccccccEEEEccEEEEEccccccccHHHHHHHHHHHHHHHHHHHHcccHHHHHcccHHHHHcEEEEccEEccHHHHHHcccccccHHHHcc //