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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56473.1
DDBJ      :             putative cobalamin biosynthesis protein
Swiss-Prot:             

Homologs  Archaea  44/68 : Bacteria  377/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
:305 amino acids
:PSIPRED
:DISOPRED
:RPS:PFM   89->285 PF03186 * CobD_Cbib 1e-35 50.5 %
:HMM:PFM   10->288 PF03186 * CobD_Cbib 1.5e-95 47.5 276/292  
:BLT:SWISS 3->286 COBD_MYCTU 4e-67 56.3 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56473.1 GT:GENE BAD56473.1 GT:PRODUCT putative cobalamin biosynthesis protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 1778692..1779609 GB:FROM 1778692 GB:TO 1779609 GB:DIRECTION + GB:PRODUCT putative cobalamin biosynthesis protein GB:PROTEIN_ID BAD56473.1 LENGTH 305 SQ:AASEQ MRTGKSTAAGLVLGFALDRALGDPRRWHPVAGFGSAALALESVTYADRRTAGLVHESVAVGAVVGFGLVLRRGGVAATALATWTALGGRSLARTGRAMARRLESGDVDGARALLPSLCGRDPAVLDADGLARAALESIAENTSDAAVGPLVWGAIAGVPGLLGYRAINTLDAMIGYRDERYRRFGWAAARTDDVANLLPARLTGLLTAALAPVVGGRPRAVLRAWRRDAGKHPSPNAGVAEAAMAGALGVRLGGRTRYRHGTELRPTLGDGPAPTVADLRRAVRLSEAVQVGAVAVAAAAAMLRR GT:EXON 1|1-305:0| BL:SWS:NREP 1 BL:SWS:REP 3->286|COBD_MYCTU|4e-67|56.3|284/313| SEG 58->88|vavgavvgfglvlrrggvaatalatwtalgg| SEG 197->215|llparltglltaalapvvg| SEG 237->249|agvaeaamagalg| SEG 288->301|avqvgavavaaaaa| RP:PFM:NREP 1 RP:PFM:REP 89->285|PF03186|1e-35|50.5|192/290|CobD_Cbib| HM:PFM:NREP 1 HM:PFM:REP 10->288|PF03186|1.5e-95|47.5|276/292|CobD_Cbib| GO:PFM:NREP 2 GO:PFM GO:0009236|"GO:cobalamin biosynthetic process"|PF03186|IPR004485| GO:PFM GO:0016021|"GO:integral to membrane"|PF03186|IPR004485| OP:NHOMO 431 OP:NHOMOORG 421 OP:PATTERN -------111111111-1--1--1----11--11111111111-1111111111111111--1---11 ---11-11----1-11111-11--1111111111111111-111----------------11111211111----------1------11-1-111---------1-1-----------------11111111111111113241-111111111111111---111111111-----1--1-1-1------1-----------------1-------1111---11111111---------------------------------11---------------------------------------------1----------1111111111111111111111111--1111111111--111211--1111-1--------11111---1111111111111111-21111111-1--1111111111111111-111111111111111111-11-1111-------------------------------1--------1111111111111111111111111111--111-1111111-1-11111111-----------111-1111-11111111-111111111-----1-1-----------------------------1-1-1-1-------------------1-----11-------1---1--------------------------------111--11-1111111111111111----------1------------------------111-1-------------------------1111111111111111111---------------------1----11111---------1---1111--------1---------------------------1--11-1-----1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-4| PSIPRED cccHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHccccccccccHHHHHHHHHHcccccccEEEccEEEEEccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc //