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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56476.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  57/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
f.33.1
:293 amino acids
:PSIPRED
:DISOPRED
:RPS:SCOP  13->104 1iwoA4  f.33.1.1 * 7e-04 31.2 %
:RPS:PFM   33->233 PF02104 * SURF1 3e-11 31.4 %
:HMM:PFM   21->232 PF02104 * SURF1 9.7e-33 28.6 196/210  
:BLT:SWISS 1->293 Y2259_MYCBO 5e-60 49.3 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56476.1 GT:GENE BAD56476.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(1781327..1782208) GB:FROM 1781327 GB:TO 1782208 GB:DIRECTION - GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD56476.1 LENGTH 293 SQ:AASEQ MRRLTFLLRPSWVILGVVVVAFAYLCFTVLAPWQLGKNTATEERNQLIADSVRAEPVDVTGVLDAPADPRSEWRRVIATGGFVPESTVLVRLRHLDGAPGYAVLAAFRLDDGRTLLVDRGLVAAVDGSRPPQVPDPPTGPQRLEARVRLSEGVSAERPPLVEDGYRQVYSIDTAQAGTVMGQRLTPIPVGERGGYLQLSEGQPGAFAPTPLPQLDAGPYLSYGLQWLAFGIMAPLGLGYFVYAELRERRREKAGQPPTADPGTAEPATGPAEPEPAPAPSTEARLADRYGRRR GT:EXON 1|1-293:0| BL:SWS:NREP 1 BL:SWS:REP 1->293|Y2259_MYCBO|5e-60|49.3|268/271| TM:NTM 2 TM:REGION 10->32| TM:REGION 223->244| SEG 130->140|ppqvpdpptgp| SEG 256->283|pptadpgtaepatgpaepepapapstea| RP:PFM:NREP 1 RP:PFM:REP 33->233|PF02104|3e-11|31.4|191/207|SURF1| HM:PFM:NREP 1 HM:PFM:REP 21->232|PF02104|9.7e-33|28.6|196/210|SURF1| RP:SCP:NREP 1 RP:SCP:REP 13->104|1iwoA4|7e-04|31.2|77/472|f.33.1.1| OP:NHOMO 60 OP:NHOMOORG 57 OP:PATTERN -------------------------------------------------------------------- ----111211211111111-11111111111111111111------1-1111211111--1111111111----------------------------------------------------------------------1------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 127-136, 153-161, 245-266, 278-293| PSIPRED ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHcccEEEEEEEEEcccEEEEccEEccccccEEEEEEEEEccccEEEEEccccccccccccccccccccccEEEEEEEEccccccccccccccccccEEEEccHHHHHHHHccccccEEEEEcccEEEEccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccHHHHHHHHHHccccc //