[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56486.1
DDBJ      :             putative phosphoglycerate mutase
Swiss-Prot:             

Homologs  Archaea  20/68 : Bacteria  480/915 : Eukaryota  23/199 : Viruses  0/175   --->[See Alignment]
c.55.3c.60.1
:406 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   17->134 2ehgA PDBj 3e-14 40.9 %
:BLT:PDB   206->362 1h2eA PDBj 4e-17 34.0 %
:RPS:PDB   11->130 3d0pC PDBj 4e-16 18.1 %
:RPS:PDB   204->404 2a6pA PDBj 3e-35 27.6 %
:RPS:SCOP  11->130 1zbfA1  c.55.3.1 * 1e-16 17.2 %
:RPS:SCOP  206->405 1ebbA  c.60.1.1 * 4e-34 28.8 %
:HMM:SCOP  2->131 1zbfA1 c.55.3.1 * 4.9e-35 37.6 %
:HMM:SCOP  205->406 1ebbA_ c.60.1.1 * 2.1e-59 49.5 %
:RPS:PFM   8->131 PF00075 * RnaseH 2e-04 33.0 %
:RPS:PFM   208->361 PF00300 * PGAM 1e-19 40.9 %
:HMM:PFM   207->360 PF00300 * PGAM 9e-40 41.6 154/158  
:HMM:PFM   10->133 PF00075 * RnaseH 2.8e-17 28.9 114/131  
:BLT:SWISS 5->124,190->405 Y2253_MYCBO 2e-57 61.6 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56486.1 GT:GENE BAD56486.1 GT:PRODUCT putative phosphoglycerate mutase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 1789965..1791185 GB:FROM 1789965 GB:TO 1791185 GB:DIRECTION + GB:PRODUCT putative phosphoglycerate mutase GB:PROTEIN_ID BAD56486.1 LENGTH 406 SQ:AASEQ MSYPKVIVEADGGSRGNPGPAGYGAVVFDADHVAVLAERRESVGIATNNVAEYRGLIAGLEAAAELGARTVDVRMDSKLVVEQMSGRWKVKHAAMIPLADRARRLVAGFDAVTFTWIPRAQNAHADRLANEAMDDAAVVEEVRTARDAGHAPTDLGAHRGAARPGPAATGEGAAALPDSGTPDTRVLPDTPADPAPGWTGATGRPTRLLLLRHGQTELSVQRRYSGRGNPPLTELGREQAARAAKMLAAKGGIAAVITSPLGRARQTAEAAAAALGVDVQTDDGLIETDFGEWEGLTFREAAERDPELHAAWLGDPSVPAPGGESFDQVRARVEAARRDLVALYPGRNLVVVSHVTPIKTLLQLALGVGPSLLYRLHLDLASLSIAEFYPDGGSSVRLVNDTSYLA GT:EXON 1|1-406:0| BL:SWS:NREP 1 BL:SWS:REP 5->124,190->405|Y2253_MYCBO|2e-57|61.6|336/364| SEG 58->68|agleaaaelga| SEG 156->175|gahrgaarpgpaatgegaaa| SEG 240->249|aaraakmlaa| SEG 268->274|aeaaaaa| BL:PDB:NREP 2 BL:PDB:REP 17->134|2ehgA|3e-14|40.9|115/149| BL:PDB:REP 206->362|1h2eA|4e-17|34.0|156/207| RP:PDB:NREP 2 RP:PDB:REP 11->130|3d0pC|4e-16|18.1|116/133| RP:PDB:REP 204->404|2a6pA|3e-35|27.6|192/193| RP:PFM:NREP 2 RP:PFM:REP 8->131|PF00075|2e-04|33.0|112/132|RnaseH| RP:PFM:REP 208->361|PF00300|1e-19|40.9|154/158|PGAM| HM:PFM:NREP 2 HM:PFM:REP 207->360|PF00300|9e-40|41.6|154/158|PGAM| HM:PFM:REP 10->133|PF00075|2.8e-17|28.9|114/131|RnaseH| GO:PFM:NREP 2 GO:PFM GO:0003676|"GO:nucleic acid binding"|PF00075|IPR002156| GO:PFM GO:0004523|"GO:ribonuclease H activity"|PF00075|IPR002156| RP:SCP:NREP 2 RP:SCP:REP 11->130|1zbfA1|1e-16|17.2|116/132|c.55.3.1| RP:SCP:REP 206->405|1ebbA|4e-34|28.8|198/202|c.60.1.1| HM:SCP:REP 2->131|1zbfA1|4.9e-35|37.6|125/0|c.55.3.1|1/1|Ribonuclease H-like| HM:SCP:REP 205->406|1ebbA_|2.1e-59|49.5|200/202|c.60.1.1|1/1|Phosphoglycerate mutase-like| OP:NHOMO 858 OP:NHOMOORG 523 OP:PATTERN ---1--11-------1-111--1--1111112-----------1--11------------------11 1121222344322233322-2222442222232333533424333121121--2212---232134542521---1112--1111222------1------------1-1--------------------------6666622341255222412221111211323243111111111111111211111111223333331333232--11123331221-111--11121---------------------111--121-111221112---------------1-----------------------------------14313-----------1112---112--21-1111113--111111-21-12-1111-----21212222132-111111111111-112223112221111232121-4311----11-1112-1--------1111-211-----------------------------------1111-211--21------1-11---12111111-1111211111111111-12---2-----------112-11-111-111----111111131122242-1-------------------------11211---1----2--------11-1-1--11---1111------21--1112222222222-223221222222222222121211111222222222222222211112222--211111111111-------------1--------11--------------------------1------1--11-----------------------111212112221111----11111--------------------------------------2---111111-- --------1---------------------------------------------------------------------------------2---1------21-------------------------------------------------------------------------11-11-21-1115-51112121- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 362 STR:RPRED 89.2 SQ:SECSTR ##TcEEEEEEEEEEccccEEEEEEEEETTTccHHTEEEEEEEEEEEcHHHHHHHHHHHHHHHHHHTTcccccEEEccHHHHHHHHHTcccccccccTTTHHHHHHHHHHHcccccEEEccHHHHcccTTcEEEEEEEGGGccGGGccEEcTTT##########################################HTccTTccccccEEEEEccccTTGGGTcccccccccccHHHHHHHHHHHHHHHTcccccEEEEcccHHHHHHHHHTHTTTccccEEcGGGcccccGGGTTccHHHHHTTcTTccHHHHHcGGcccTTcccHHHHHHHHHHHHHHHHHHTTTccEEEEEcHHHHHHHHHHHTTccGGGGGGccccTTEEEEEEEETTTEEEEEEEEEEccTc DISOP:02AL 1-2, 160-204| PSIPRED ccccEEEEEEccccccccccccEEEEEEEccccEEEEEEEEcccccccHHHHHHHHHHHHHHHHHccccEEEEEEcHHHHHHHHccccccccHHHHHHHHHHHHHHHHcccEEEEEEccHHcHHHHHHHHHHccccccccccccHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEccccccccccEEEccccccccHHHHHHHHHHHHHHHHHccccEEEEccHHHHHHHHHHHHHHccccEEEcHHHHHccccccccccHHHHHHHcHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHccccEEEEEEccHHHHHHHHHHHcccHHHHHHccccccEEEEEEEcccccEEEEEEEcccccc //