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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56488.1
DDBJ      :             putative ribonuclease
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  143/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
:326 amino acids
:PSIPRED
:DISOPRED
:RPS:PFM   47->297 PF03631 * Ribonuclease_BN 4e-25 32.9 %
:HMM:PFM   40->295 PF03631 * Ribonuclease_BN 2.8e-66 33.2 250/258  
:BLT:SWISS 69->277 YFKH_BACSU 1e-19 26.2 %
:BLT:SWISS 248->293 RBN_SHEON 4e-09 50.0 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56488.1 GT:GENE BAD56488.1 GT:PRODUCT putative ribonuclease GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 1792178..1793158 GB:FROM 1792178 GB:TO 1793158 GB:DIRECTION + GB:PRODUCT putative ribonuclease GB:PROTEIN_ID BAD56488.1 LENGTH 326 SQ:AASEQ MSSETAVRHGPALDWSGGPARLNWRSWWGVLRRTVTEFRADNVTDWAAALTYYSVLSVFPGIIVLTALLGALSPTATDELVTSIREIGPGSGTQLLVDAIEELRGASSLAGPMALFGVATALWTASGYIGAFMRAANAIYEVEEGRPLWKTVPVRVGLTAAMVVLIAVTAVGVVATGGIARRVGDWLGLGPTAVAVWEVAKWPVLAVLVSLAFALLYWVAPNARQPGFRWLSPGSVLAVLVWVLASAGFAFYVANFGSYNKVYGSLGGVAVFLVWVWISNVAVLLGAEFDAELARGRRIEQGLPPDQEPFLPPRDDWDDDPDAAPR GT:EXON 1|1-326:0| BL:SWS:NREP 2 BL:SWS:REP 69->277|YFKH_BACSU|1e-19|26.2|206/275| BL:SWS:REP 248->293|RBN_SHEON|4e-09|50.0|46/295| TM:NTM 6 TM:REGION 51->73| TM:REGION 113->135| TM:REGION 154->176| TM:REGION 194->216| TM:REGION 233->255| TM:REGION 267->289| SEG 163->184|vvliavtavgvvatggiarrvg| SEG 204->216|vlavlvslafall| SEG 235->247|svlavlvwvlasa| SEG 312->325|pprddwdddpdaap| RP:PFM:NREP 1 RP:PFM:REP 47->297|PF03631|4e-25|32.9|246/258|Ribonuclease_BN| HM:PFM:NREP 1 HM:PFM:REP 40->295|PF03631|2.8e-66|33.2|250/258|Ribonuclease_BN| GO:PFM:NREP 1 GO:PFM GO:0004540|"GO:ribonuclease activity"|PF03631|IPR004664| OP:NHOMO 171 OP:NHOMOORG 143 OP:PATTERN -------------------------------------------------------------------- 111-3--1111----------1-----------1111-11-1-11-21-22111111-----1-2--2111-----------2--------------------1-----1---------------------------------------1------------------------------------------11-----------1---111111---111-21-111111-11--------------1------1--------------------------------------------------------------------1-1-1111111-1---11-----1----------------------------1--2------12111--11111------------33232233121-------1---11-----13-11111----------1--1--11-------------------------------------------------------------------------------------------------------------------------111------11112--------------------------------11----11-----------------------1---------------------------------------------------------------------------------------------------------------------------------------1-11111111-11111111-----------------------------------------------------------------------------------------------1- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-3, 6-18, 295-309, 319-326| PSIPRED cccccccccccccccccccccccHHHHHHHHHHHHHHHcHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccEEEEcccccccHHHHHHHHHHccccccccHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccEEccHHHHHHHHHHHHHHHHHHHHHHHccHHHHHcccccEEEEEEEEHHHHHHHHHcccccHHHHHHHHHHcccccccccccccccccccccccccc //