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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56489.1
DDBJ      :             putative hydrolase
Swiss-Prot:             

Homologs  Archaea  9/68 : Bacteria  108/915 : Eukaryota  28/199 : Viruses  0/175   --->[See Alignment]
c.69.1
:295 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   1->119 2hdwB PDBj 2e-08 31.1 %
:RPS:PDB   29->270 1e89B PDBj 4e-12 8.7 %
:RPS:SCOP  5->145 2jbwA1  c.69.1.41 * 1e-12 21.3 %
:HMM:SCOP  11->296 1mpxA2 c.69.1.21 * 3.8e-40 26.2 %
:RPS:PFM   11->137 PF05448 * AXE1 3e-07 37.6 %
:HMM:PFM   197->269 PF01738 * DLH 1.3e-06 31.5 73/217  
:HMM:PFM   10->77 PF05448 * AXE1 9.9e-05 30.3 66/320  
:HMM:PFM   49->209 PF02129 * Peptidase_S15 1.4e-09 19.7 152/272  
:BLT:SWISS 30->288 YPT2_ECOLX 7e-24 28.1 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56489.1 GT:GENE BAD56489.1 GT:PRODUCT putative hydrolase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(1793178..1794065) GB:FROM 1793178 GB:TO 1794065 GB:DIRECTION - GB:PRODUCT putative hydrolase GB:PROTEIN_ID BAD56489.1 LENGTH 295 SQ:AASEQ MERLEVSFVSGGQQCAAWLYPPAGVPKPRPLVVMGHGLGGTRDMGLDRYARRFAAAGMGVLVFDYRHFGASEGDPRQLLHIGRQREDWRAAIAFARTLRGIDKTRIALWGTSFGAGHVLTVAPEDDYIAAVVAQVPFTSGWASAWAKGPTSLTKVATIAATDLVIGSLRRKPVRIRLAGRKRAAALMSAPDVPEGYGRLAEESATYEPKVAARVAFSALFDAPGKHAKELKMPVFYAIADNDSVAPVEPALKAAERTKHAVVKRYPVGHFDVYFDDVFEQAVYDQTEFLVSVLRP GT:EXON 1|1-295:0| BL:SWS:NREP 1 BL:SWS:REP 30->288|YPT2_ECOLX|7e-24|28.1|253/286| BL:PDB:NREP 1 BL:PDB:REP 1->119|2hdwB|2e-08|31.1|119/318| RP:PDB:NREP 1 RP:PDB:REP 29->270|1e89B|4e-12|8.7|231/258| RP:PFM:NREP 1 RP:PFM:REP 11->137|PF05448|3e-07|37.6|125/297|AXE1| HM:PFM:NREP 3 HM:PFM:REP 197->269|PF01738|1.3e-06|31.5|73/217|DLH| HM:PFM:REP 10->77|PF05448|9.9e-05|30.3|66/320|AXE1| HM:PFM:REP 49->209|PF02129|1.4e-09|19.7|152/272|Peptidase_S15| RP:SCP:NREP 1 RP:SCP:REP 5->145|2jbwA1|1e-12|21.3|136/359|c.69.1.41| HM:SCP:REP 11->296|1mpxA2|3.8e-40|26.2|267/0|c.69.1.21|1/1|alpha/beta-Hydrolases| OP:NHOMO 214 OP:NHOMOORG 145 OP:PATTERN --------111111---------1------1---------1--------------------------- ----2-------1-1-1----3--22-----132123171------------------------------1-----------1-----------------------------------------------------2--------1------------------------------------------------------1--11-111-------11------------------------------1----------------------------------------------------------------------------------------------------------------------------------------1------1---------------------------2--------1-1-----------------------------------------------------------------------1-2-1--11----11-1------3---2-1------1------1-------------------------2-1---------1--------1---1--1------------------------------1---------11--1-------3-----1--------------1--1--1221121221-211112---121111111---1-----------------------1-1-111---------------------------1------------------3332212-----11-1----------1-11-------------------1-------------1-------------------------------------------------------------- ----------1-----22--1214142-------------------1123-525---1----1-2-------1-------------------2--------11-------------------------------------------------------------------------22------1---1---------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 295 STR:RPRED 100.0 SQ:SECSTR ETTHHHHHHHccccccccEEEEEEEcccccEEEEEccTTccGGGGGTTHHHHHHHTTcEEEEEccTTcTTccccGGGcccHHHHTHHHHHHHHHHHHHHccTTccEEEEEEGGGHHHHHHHHGGGEEEEEEEccccccccccTTHHHHHHHHHccccTTcEEEEEEcTTccEEEEEEccHHHHHHHHHHHHTcTTccHHHHHHHHHHcccccccHHHHHHcccccTTTGGGccEEEEEcTTcccccHHHHHHHHHHccccEEEEccccccTGGGGHHHHHHHHHHHHHHEEEccc PSIPRED cEEEEEEEccccEEEEEEEEEccccccccEEEEEEccccccHHccHHHHHHHHHHcccEEEEEcccccccccccccccccHHHHHHHHHHHHHHHHHccccccccEEEEEEcHHHHHHHHHHcccccccEEEEEccccccHHHHHHHcHHHHHHHHHHHHHHHHHHHccccHHHHHHccccccHHHHccccHHHHHHHHcccccccccHHHHHHHHHHHcccHHHHHHHccccEEEEEEcccccccHHHHHHHHHHccccEEEEEcccccccccccHHHHHHHHHHHHHHHHccc //