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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56494.1
DDBJ      :             putative hydrolase
Swiss-Prot:             

Homologs  Archaea  1/68 : Bacteria  322/915 : Eukaryota  48/199 : Viruses  0/175   --->[See Alignment]
c.69.1
:322 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   4->319 1azwA PDBj e-106 62.1 %
:RPS:PDB   13->320 3e3aB PDBj 3e-30 26.6 %
:RPS:SCOP  22->320 1mt3A  c.69.1.7 * 4e-46 28.0 %
:HMM:SCOP  16->302 1mtzA_ c.69.1.7 * 5.8e-59 33.3 %
:RPS:PFM   64->300 PF00561 * Abhydrolase_1 3e-15 38.2 %
:HMM:PFM   63->302 PF00561 * Abhydrolase_1 3e-30 25.1 215/231  
:BLT:SWISS 3->317 PIP_ARATH e-109 59.2 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56494.1 GT:GENE BAD56494.1 GT:PRODUCT putative hydrolase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(1798128..1799096) GB:FROM 1798128 GB:TO 1799096 GB:DIRECTION - GB:PRODUCT putative hydrolase GB:PROTEIN_ID BAD56494.1 LENGTH 322 SQ:AASEQ MMRRELYPPIEPFDSGMLDVGDGQRVYWEVSGNPEGKPVVFLHGGPGGGTAPLHRRFFDPACYRIVLFDQRGCGRSTPHIADGADLSVNTTWHLVADIEALREHLGVERWQVFGGSWGSTLALAYAQRHPERVTEMVLRGVFLLRRKEIDWYYNGAAGYVYPDEWEKFLAPVPAGERDGDLVAAYHRLLHSPDPAVVERAAVAWSVWEGSTSSLLPHPDRVAETAEPRFAIAFARIENHYFRHGGFLAEGQLLRDIDRIAHLPVEIVQGRHDIVCPAVSAWELHRAWPGSRLHIVDDAGHAANEPGIVHHLVEATDRFAKEG GT:EXON 1|1-322:0| BL:SWS:NREP 1 BL:SWS:REP 3->317|PIP_ARATH|e-109|59.2|311/380| BL:PDB:NREP 1 BL:PDB:REP 4->319|1azwA|e-106|62.1|311/313| RP:PDB:NREP 1 RP:PDB:REP 13->320|3e3aB|3e-30|26.6|259/275| RP:PFM:NREP 1 RP:PFM:REP 64->300|PF00561|3e-15|38.2|199/211|Abhydrolase_1| HM:PFM:NREP 1 HM:PFM:REP 63->302|PF00561|3e-30|25.1|215/231|Abhydrolase_1| RP:SCP:NREP 1 RP:SCP:REP 22->320|1mt3A|4e-46|28.0|268/293|c.69.1.7| HM:SCP:REP 16->302|1mtzA_|5.8e-59|33.3|264/290|c.69.1.7|1/1|alpha/beta-Hydrolases| OP:NHOMO 477 OP:NHOMOORG 371 OP:PATTERN --------------------------------------------1----------------------- --2-3-11111-1----11-13---211111-22221343-11---11-221-----1--11-12111121----------2-------------------2-11--1--------------------------------------2--2---11--------1--211111--1111-11-121-11---1--1111122111112212-----221-11----------1----------------------1--11-----11-----------------------------------------------1---------------------------------------------------------1----2222-------211--11111111111111112------1---11-211233123421--112111111111111111111122-1111------------------------------1-22-122112222221111122--1111-11212121--221-1----2211-11-1111--111111111--121-----------------------11-122--------------------------------1112-1-111111--1111-2111-12---1--1------1-----------------------------------------11---1---1---------1---------111111111111---------1111111----------------------------1111111211111111111----1---1---1----------2211111-111111------------------1--------11--1-1-----11------------------ ----111-----111-111--------------111---------------111-----------------------------------1211111----121----19-------------------------------------------------1---121---------3111-------1121123-131123 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 322 STR:RPRED 100.0 SQ:SECSTR TGGcccccccccEEccccTTccccEEEEEEEcEcccEEEEEEccTTccGGGTTHHHHHHHTTEEEEEEccTTcGGGccccccGTTcccccHHHHHHHHHHHHHHTTcccEEEEEETHHHHHHHHHHHHcGGGEEEEEEEcccccccHHHHHHHHHHHHcGGGHHHHTTccccHHHHHHHHHHHHccHHHHTcHHHHHHHHHTHHHHccccccccccccccccccHHHHHHTTccccccHTTGGGHHHHHHHHcGGGGGGccccEEEEEETTcccccHHHHHHHHHHcTTEEEEEETTccTTHHcHHHHHHHHHcHHHHHHHT DISOP:02AL 1-4| PSIPRED ccccccccccccccEEEEEccccEEEEEEEEccccccEEEEEEccccccccHHHHHHHcccccEEEEEccccccccccccccccccccccHHHHHHHHHHHHHHcccccEEEEEEcHHHHHHHHHHHHHHHHHcEEEEEccccccccHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHccHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHcccEEEEEccccccccHHHHHHHHHHccccEEEEEcccccccccHHHHHHHHHHHHHHHHcc //