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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56502.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  35/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
c.69.1
:390 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   253->384 2c7bA PDBj 6e-05 6.9 %
:RPS:SCOP  303->384 1lnsA3  c.69.1.21 * 1e-04 10.1 %
:HMM:SCOP  30->384 1mpxA2 c.69.1.21 * 9.2e-25 26.4 %
:HMM:PFM   94->131 PF00561 * Abhydrolase_1 7.5e-05 31.6 38/231  
:HMM:PFM   278->366 PF00561 * Abhydrolase_1 0.00014 17.7 79/231  
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56502.1 GT:GENE BAD56502.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(1804794..1805966) GB:FROM 1804794 GB:TO 1805966 GB:DIRECTION - GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD56502.1 LENGTH 390 SQ:AASEQ MSPIERIPYVVAYANTTGGRDAYGGLTGTVTLESQLVRPRDHSSDTVLVLMHPVSSGTYLPIVGALAKAGHHVIVCNSRYRGADAALLMEKVAQDLGECLRHAKKRLGYDKTVLLGWSGGGSLSVFYQQQAQRPTLTAGPSGDGPDLTAADLPPADGLLLVAAHISRHHTLTESMDAAILDETDPSRRDPALDLYDPANPEQPPYSPEFLARYRQAQIDRNRRITAWVRAKLAALRAAGRPNDEFGFVVHGTMADPRWLDPTIDPNDRTPGESYLGDPQEVNMGPFGLARFTTLRSWLSQWSYDDARADAVACGPDIAVPTLVMFHSADNICTPSHAHAIHAAIGHPDKELHEIAGANHYYLGPDQREPLTEAVRIIGDWLHRHDLAPTT GT:EXON 1|1-390:0| SEG 114->124|llgwsgggsls| SEG 143->163|dgpdltaadlppadglllvaa| SEG 229->238|raklaalraa| SEG 336->346|hahaihaaigh| RP:PDB:NREP 1 RP:PDB:REP 253->384|2c7bA|6e-05|6.9|131/290| HM:PFM:NREP 2 HM:PFM:REP 94->131|PF00561|7.5e-05|31.6|38/231|Abhydrolase_1| HM:PFM:REP 278->366|PF00561|0.00014|17.7|79/231|Abhydrolase_1| RP:SCP:NREP 1 RP:SCP:REP 303->384|1lnsA3|1e-04|10.1|79/405|c.69.1.21| HM:SCP:REP 30->384|1mpxA2|9.2e-25|26.4|269/0|c.69.1.21|1/1|alpha/beta-Hydrolases| OP:NHOMO 45 OP:NHOMOORG 36 OP:PATTERN -------------------------------------------------------------------- --------------11211-12--2211111121112-11-1----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-------------------------------------------1----------------1-----------------------------------------------------------2----------1-----------------2--11-1------------1-12------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------1---------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 132 STR:RPRED 33.8 SQ:SECSTR ############################################################################################################################################################################################################################################################HTTcccccEEEEEccccccccccHHHHHHHHcTTccccHHHHHHHHHHccHcTTGGGcTTTcGGGccccEEEEEETTcTTHHHHHHHHHHHHTTccEEEEEETTcTTGGGGTTTcHHHHHHHHHHHHHHHHH###### DISOP:02AL 1-2, 135-137, 388-390| PSIPRED ccccccccEEEEEccccccccEEEEcccccHHHHHHHccccccccEEEEEEEEccccEEcccHHHHHHccEEEEEEccccccccHHHHHHHHHHHHHHHHHHHHHHccccEEEEEEEccHHHHHHHHHHHcccccccccccccccccHHHHcccccEEEEEccccccHHHHHHHccHHHcccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccEEEEEEEccccEEEccccccccccccccccccccEEccccccEEEEccHHHHHHHHHHHHHHHHHHHHccccEEcEEEEEccccccccHHHHHHHHHHHcccccEEEEEccccccccccccccHHHHHHHHHHHHHHHHcccccc //