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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56503.1
DDBJ      :             putative dioxygenase
Swiss-Prot:             

Homologs  Archaea  8/68 : Bacteria  164/915 : Eukaryota  60/199 : Viruses  0/175   --->[See Alignment]
b.82.1
:363 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   105->283 1eybA PDBj 9e-08 25.3 %
:RPS:PDB   87->316 2cavA PDBj 8e-05 15.4 %
:RPS:SCOP  105->363 1ey2A  b.82.1.4 * 7e-32 23.2 %
:HMM:SCOP  13->353 1eybA_ b.82.1.4 * 6.6e-72 31.3 %
:RPS:PFM   105->317 PF04209 * HgmA 1e-24 36.2 %
:HMM:PFM   98->352 PF04209 * HgmA 3e-37 27.4 252/426  
:BLT:SWISS 3->349 Y1345_VIBCH 2e-49 34.4 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56503.1 GT:GENE BAD56503.1 GT:PRODUCT putative dioxygenase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(1805987..1807078) GB:FROM 1805987 GB:TO 1807078 GB:DIRECTION - GB:PRODUCT putative dioxygenase GB:PROTEIN_ID BAD56503.1 LENGTH 363 SQ:AASEQ MESFVHLRKGTTPRRLHADLDGLKDDELGRGGFTGRTAHLYRRNDPTAYTAVGPLRPVDVMASALTPTDSTDPAGTPLLLFANADCRILLSRRAAPMPHFVRYVDGDVLAFVHTGAGLLETEFGPLRYRAGDWVLVPKGCTFRQVPDAESTLLMIEATEEFRVPPAGYLGRHFPFDPAQITIPEPAPMDDDGRESYQVRLIHEGGPTTLYYRHHPLDVVGWRGDSFPFTFNIADYNVILSETVHLPPTVHLFMEATGVYVMNFLPKLAESAPGTETIPWYHRNVDYDEIAFFHGGDMYGVPMPPGLISHAPQGVHHGAPEKMRERARRKRDEITRIGWTTIAIDTRRRLTPSPEVLANDLGGH GT:EXON 1|1-363:0| BL:SWS:NREP 1 BL:SWS:REP 3->349|Y1345_VIBCH|2e-49|34.4|340/378| BL:PDB:NREP 1 BL:PDB:REP 105->283|1eybA|9e-08|25.3|178/410| RP:PDB:NREP 1 RP:PDB:REP 87->316|2cavA|8e-05|15.4|221/346| RP:PFM:NREP 1 RP:PFM:REP 105->317|PF04209|1e-24|36.2|210/387|HgmA| HM:PFM:NREP 1 HM:PFM:REP 98->352|PF04209|3e-37|27.4|252/426|HgmA| GO:PFM:NREP 4 GO:PFM GO:0004411|"GO:homogentisate 1,2-dioxygenase activity"|PF04209|IPR005708| GO:PFM GO:0006559|"GO:L-phenylalanine catabolic process"|PF04209|IPR005708| GO:PFM GO:0006570|"GO:tyrosine metabolic process"|PF04209|IPR005708| GO:PFM GO:0055114|"GO:oxidation reduction"|PF04209|IPR005708| RP:SCP:NREP 1 RP:SCP:REP 105->363|1ey2A|7e-32|23.2|254/419|b.82.1.4| HM:SCP:REP 13->353|1eybA_|6.6e-72|31.3|332/439|b.82.1.4|1/1|RmlC-like cupins| OP:NHOMO 246 OP:NHOMOORG 232 OP:PATTERN --------1111111----------------------------------------------1------ 11111---------111----1--11-----111112111---1---1------------111-12111------------------------------1-11111-1-1--------------------------111-----1-------------------------------------------------111111111111111------111-------------1---------------------------------------------------------------------------------------------------------------------------------------------1--1111--------1-1----------------------------1--1------1--1------------------------------1---------------------------------1---11111111111111111111111111131111--111-1----------------1--------------------------------------111112-----------------------------1------1-1-11111111111111111-----1-----------------------------------------------------------------------------------------------1-----------1---------------------------1---------1---11----------------1111111111111-1111111--------------------------------------------------------------- ------1-----11-211-31121212111111-111111111111-1--1222-1---111------------------------------1----------111---1----------------------------------------------------111--111-11-1--------1-1--11----1---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 227 STR:RPRED 62.5 SQ:SECSTR ######################################################################################EEEEcccEEEEEE###EEccEEEEEEEEcEEEEEEEETTEEEETTEEEEEcTTccEEEEEcTcccccEEEEEEEEccccTTcccEEEcccccccccGGGGccHHHHHHHHTccHHHHHHHHHTTcccccccEEEcccccccEETTcccccEEcccEEEEEEcTTTcEEEHHHHHHTEEEEEEEEcTTEEEEEEEEccEEEccEEEEEEEcccEEEEcTTcEEEEcTTccE############################################### DISOP:02AL 362-363| PSIPRED ccccccHHcccccHHHccccccHHHHHHccccccHHHHHHEEcccccccccccccccHHHHcccccccccccccccEEEEEcccccEEEEEEcccccHHHEEcccccEEEEEEEcEEEEEEcccEEEEccccEEEEccccEEEEEEccccEEEEEEEcccccccccccccccccccHHHHccccEEEEEccccccEEEEEEEccEEEEEEEcccccEEEEEEccEEEEEEEHHHccEEccEEEcccccEEEEEEEccEEEEcccccccccccccccccccccccHHHHHHHEEcccccccccccccEEEEcccccccccHHHHHHHHccccccEEEccEEEEEEEcccccccHHHHccccccc //