[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56505.1
DDBJ      :             putative hydrolase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  104/915 : Eukaryota  33/199 : Viruses  0/175   --->[See Alignment]
c.69.1d.240.1
:555 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   248->305 1mt3A PDBj 1e-04 31.0 %
:RPS:PDB   248->355 1cqzB PDBj 1e-07 14.8 %
:RPS:SCOP  244->359 1mt3A  c.69.1.7 * 1e-10 20.4 %
:RPS:SCOP  333->402 1unnC  d.240.1.1 * 1e-04 24.3 %
:HMM:SCOP  132->527 1azwA_ c.69.1.7 * 4.9e-19 21.7 %
:RPS:PFM   244->291 PF00561 * Abhydrolase_1 4e-04 35.4 %
:RPS:PFM   467->555 PF08386 * Abhydrolase_4 4e-12 47.7 %
:HMM:PFM   175->530 PF00561 * Abhydrolase_1 1.8e-46 35.3 218/231  
:BLT:SWISS 91->555 Y2248_MYCBO e-133 53.1 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56505.1 GT:GENE BAD56505.1 GT:PRODUCT putative hydrolase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 1807940..1809607 GB:FROM 1807940 GB:TO 1809607 GB:DIRECTION + GB:PRODUCT putative hydrolase GB:PROTEIN_ID BAD56505.1 LENGTH 555 SQ:AASEQ MDFLLHPCASAVGDGHVGVGTGFAVRGTRGQRLIAGPAGGNWQDRGMGLRRGCGVLVAALAVVAAGCTIERGEQAGPMPAAPAGLERFYEQAVPWGPCAGFTDDQVRLPPNAQCARIEVPVDYADPAGPTAQIALSRIPASGAKIGSLLLNPGGPGVSGLDTVAIANQTPLSERFDRVGFDPRGVGASTPAITCLTPPEADAERAERPEDNTPAGIAAAEADNRDYAAKCVQRSGAELLEHVGTREVVQDMDVIRAVLGDPKLTYLGYSYGTKLGSLYAEKFPDRVRALVLDGAVDSSQDPVQESLRQAAGFQRAFDAYAADCARTPDCPLGTDPAQAVARFRELVDPLWERPAATTDPRGLSYNDAITGVTQTLYTDDLWQVLTLGLQELRDGRGDTLLQLADLYDGRRDDGTYRNTQDAFNAIRCVDDPRVTDPAVAARQDTEYRKAAPFLDDGRGTGAAPLELCAAWPVPNSGEPHSISVQGLPTTVVVSTTEDPATPYQAGVDLAAQLGAALVTFRGNRHTAALVAGNECLDSAVIAYLVDLTIPPAGLTC GT:EXON 1|1-555:0| BL:SWS:NREP 1 BL:SWS:REP 91->555|Y2248_MYCBO|e-133|53.1|463/520| SEG 55->65|vlvaalavvaa| SEG 197->210|ppeadaeraerped| SEG 217->228|aaaeadnrdyaa| BL:PDB:NREP 1 BL:PDB:REP 248->305|1mt3A|1e-04|31.0|58/284| RP:PDB:NREP 1 RP:PDB:REP 248->355|1cqzB|1e-07|14.8|108/541| RP:PFM:NREP 2 RP:PFM:REP 244->291|PF00561|4e-04|35.4|48/211|Abhydrolase_1| RP:PFM:REP 467->555|PF08386|4e-12|47.7|88/102|Abhydrolase_4| HM:PFM:NREP 1 HM:PFM:REP 175->530|PF00561|1.8e-46|35.3|218/231|Abhydrolase_1| RP:SCP:NREP 2 RP:SCP:REP 244->359|1mt3A|1e-10|20.4|108/293|c.69.1.7| RP:SCP:REP 333->402|1unnC|1e-04|24.3|70/111|d.240.1.1| HM:SCP:REP 132->527|1azwA_|4.9e-19|21.7|254/0|c.69.1.7|1/1|alpha/beta-Hydrolases| OP:NHOMO 276 OP:NHOMOORG 137 OP:PATTERN -------------------------------------------------------------------- ----4-------1-32222-232232222222322232121-1122111111111113111211A2A8AC2--------------------------------------------------------------------11------------------1-----------------------1-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------11----------------------------------------------------------------------------------------------1---------------------------------------------------------------------------------------------------------------1---1-----11111--11111-1111-----------------------11----1---1--1----1-11-------------------------------1----------------------------------------------------------------------------------------------1------------11111111111111----------------------------------------------------------- ---------------113-41--4531------1------------222334341343-------------------------------51-1491----1-2-----3--------------------------------------------------------------------------------2---1----- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 250 STR:RPRED 45.0 SQ:SECSTR #############################################################################################################EEEEEcccccEcTccEEcc##EEEEEEEEccccTTcccEEEEccTTcccccTGGGETTccEETTTcEEEEEccTTcccccccTTcccT################################TTccccGGGcHccccHHHHHHHHHHHHHHTcccEEEEEETHHHHHHHHHHHHccTTEEEEEEEccccccccTTccHHHHHHHcGGGHHHHHHTcTTHHHHHHHHTHHHHHHHHcccTTccccccTTccHHHHHHHHHHHHccTTccHHHHHHHHHTcHHHHccc################################################################################################################################################################## DISOP:02AL 75-87, 550-554| PSIPRED ccccHHHHHHHcccccccccccEEEEEcccccEEEccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccEEEcccccccccccccccEEEEEEEccccccccccEEEEEEEEEccccccccEEEEEccccccccHHHHHHcccHHHHccccEEEEcccccccccccccccccHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHcccHHHccccHHHHHHHHHHHHHHcccccEEEEEEcHHHHHHHHHHHHccHHEEEEEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHcccHHHHHHHHHHHHHHHccccHHHHHHHHHccccccccccccHHHHccEEEEcccccccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHccccccccccccccccccccEEEEEccccccccHHHHHHHHHHccccEEEEEccccEEEEcccHHHHHHHHHHHHcccEEccccccc //