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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56511.1
DDBJ      :             putative hydrolase
Swiss-Prot:             

Homologs  Archaea  8/68 : Bacteria  271/915 : Eukaryota  110/199 : Viruses  0/175   --->[See Alignment]
c.69.1
:279 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   3->133 1imjA PDBj 1e-08 32.5 %
:RPS:PDB   18->273 3dyvA PDBj 2e-18 18.0 %
:RPS:SCOP  19->275 1r1dA  c.69.1.29 * 2e-20 20.6 %
:HMM:SCOP  12->276 1mpxA2 c.69.1.21 * 1.6e-45 28.9 %
:RPS:PFM   13->86 PF12146 * Hydrolase_4 3e-19 50.0 %
:RPS:PFM   58->236 PF00561 * Abhydrolase_1 7e-08 30.9 %
:HMM:PFM   13->87 PF12146 * Hydrolase_4 5.3e-28 53.3 75/79  
:HMM:PFM   57->233 PF00561 * Abhydrolase_1 2.3e-10 26.7 176/231  
:HMM:PFM   210->258 PF01738 * DLH 6.5e-05 26.5 49/217  
:BLT:SWISS 13->276 MGLL_MOUSE 1e-33 32.2 %
:PROS 118->137|PS01094|UPF0076
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56511.1 GT:GENE BAD56511.1 GT:PRODUCT putative hydrolase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(1815835..1816674) GB:FROM 1815835 GB:TO 1816674 GB:DIRECTION - GB:PRODUCT putative hydrolase GB:PROTEIN_ID BAD56511.1 LENGTH 279 SQ:AASEQ MSQTKDGSFEGTGSRIAWRAWLPDGPARAAIVLVHGVAEHSGRYVHVGTRLADAGYAVYALDHVGHGKSAGGKANIGSLDGAADNVAGMLDIAAREHPGVPRFLLGHSMGALIVLYLATRAPIDVAGVVVSAPPLEIPVGNPLQKLLAPVLTRLTPNLGVLQLDSSSISRDPAVVAAYDADPLVYRGKLPARTATEILDGSLTVKRRLGKLTVPTLVLHGTADTLAAPSSADLIERGAAAEDLTVHRYDGLYHEVFNEPEKETVFADLERWLQDHLTTQ GT:EXON 1|1-279:0| BL:SWS:NREP 1 BL:SWS:REP 13->276|MGLL_MOUSE|1e-33|32.2|261/303| PROS 118->137|PS01094|UPF0076|PDOC00838| SEG 171->185|dpavvaaydadplvy| BL:PDB:NREP 1 BL:PDB:REP 3->133|1imjA|1e-08|32.5|126/208| RP:PDB:NREP 1 RP:PDB:REP 18->273|3dyvA|2e-18|18.0|233/238| RP:PFM:NREP 2 RP:PFM:REP 13->86|PF12146|3e-19|50.0|74/79|Hydrolase_4| RP:PFM:REP 58->236|PF00561|7e-08|30.9|175/211|Abhydrolase_1| HM:PFM:NREP 3 HM:PFM:REP 13->87|PF12146|5.3e-28|53.3|75/79|Hydrolase_4| HM:PFM:REP 57->233|PF00561|2.3e-10|26.7|176/231|Abhydrolase_1| HM:PFM:REP 210->258|PF01738|6.5e-05|26.5|49/217|DLH| RP:SCP:NREP 1 RP:SCP:REP 19->275|1r1dA|2e-20|20.6|238/242|c.69.1.29| HM:SCP:REP 12->276|1mpxA2|1.6e-45|28.9|253/0|c.69.1.21|1/1|alpha/beta-Hydrolases| OP:NHOMO 605 OP:NHOMOORG 389 OP:PATTERN --1-------------1------1------------------------------11-111-------- ----1-1-----1-11111-12111211111121112322-111--11-1---1---1-----3--1-1-1--------122----------------------1---1--------------------------------1111-2-11----1-----------1111-------------112--11-1112222222222222222111-12221--11--11111111---------1----11---11----------------1-----111----------------------------------------------1-11111111112--11---1-112-1-1--11------1-111----1-1-----------------1----11111111111--1-11---11--111111111111----1-------------------11--111---------------------------------1--11--1111111111111121111111112121--111-11113--11----1---1--------------1111--------------------111112--------------1------------------1---1--------------------------12-------------------------------------------------------------------1----------------------------------121-----11----------------11111122222121222221--------------------------------------------1111122--------1---------------------------11-11111-1--- ----222-212-1121----11-----11-1-1--------------111112111111111-11--1---------------------111-111-------111-121H21111-1--111-42-11782-314---1211---11--1--1111112425211-------111322E12-249DEF-F62242351 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 279 STR:RPRED 100.0 SQ:SECSTR HHccTTcccccETccEEcccEEEcccccEEEEEEccTTccGGGGHHHHHHHHHTTcEEEEcccTTccccccTHHHHHHccHHHHHHHHHHHHHHHHTTccEEEEEEETHHHHHHHHHHHHcccccEEEEEccccccccccHHHHHHHHHHHHHHHHTccccHHHcHHHHHHTTcTTccHHHHHHHHHHHHHHHHHHHHHHHHHHHHTGGGccccEEEEEETTcccccTTHHHHHHHcTTcccEEEEEETTccccTTTcTTHHHHHHHHHHHHHHHTccE DISOP:02AL 1-2, 278-279| PSIPRED ccccEEEEEEEccEEEEEEEEccccccccEEEEEEcccccHHHHHHHHHHHHHcccEEEEEcccccccccccccccccHHHHHHHHHHHHHHHHHHcccccEEEEEEcHHHHHHHHHHHHccHHHcEEEEEccccccccccHHHHHHHHHHHHHHHHHHHHHccHHHHcccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHccccEEEEEccccccccHHHHHHHHHHccccccEEEEEccccccccccccHHHHHHHHHHHHHHHHccc //