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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56552.1
DDBJ      :             putative carbohydrate kinase
Swiss-Prot:             

Homologs  Archaea  30/68 : Bacteria  154/915 : Eukaryota  3/199 : Viruses  0/175   --->[See Alignment]
c.72.1
:322 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   1->322 2pknA PDBj e-112 62.7 %
:RPS:PDB   1->308 2c4eA PDBj 2e-31 22.3 %
:RPS:SCOP  2->308 1gqtA  c.72.1.1 * 5e-29 17.9 %
:HMM:SCOP  1->301 1dgmA_ c.72.1.1 * 1.8e-55 31.4 %
:RPS:PFM   47->293 PF00294 * PfkB 2e-15 39.3 %
:HMM:PFM   32->294 PF00294 * PfkB 1.9e-46 30.6 258/300  
:BLT:SWISS 1->322 ADOK_MYCTU e-111 62.7 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56552.1 GT:GENE BAD56552.1 GT:PRODUCT putative carbohydrate kinase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 1856136..1857104 GB:FROM 1856136 GB:TO 1857104 GB:DIRECTION + GB:PRODUCT putative carbohydrate kinase GB:PROTEIN_ID BAD56552.1 LENGTH 322 SQ:AASEQ MSIAVSASIATDHLMRFPGRFADVLLADQLDHVSLSFLVDDLQIRRGGVAGNIAFAMGVLNRSPLLVGAVGADFGEYRAWLEKHGVDCSTVHVSDRAHTARFVCTTDDDMAQIASFYPGAMSEARDISIAELAGSKQLDLVLIGANDPEAMLRHTDECRELGIPFAADPSQQLARLDGDQAVRLIDGAAYLFTNKYEWGLLLQKTGLSEAEVAARVGIRVTTLGAEGVLVVDADGSEVRVGVVPEREKVEPTGVGDAFRAGFLTGHTAGLSLERAAQLGSLVAVLVLETMGTQEWTLNKDDALDRLTQAYGPDAAADIKPLL GT:EXON 1|1-322:0| BL:SWS:NREP 1 BL:SWS:REP 1->322|ADOK_MYCTU|e-111|62.7|322/324| BL:PDB:NREP 1 BL:PDB:REP 1->322|2pknA|e-112|62.7|322/323| RP:PDB:NREP 1 RP:PDB:REP 1->308|2c4eA|2e-31|22.3|292/299| RP:PFM:NREP 1 RP:PFM:REP 47->293|PF00294|2e-15|39.3|242/295|PfkB| HM:PFM:NREP 1 HM:PFM:REP 32->294|PF00294|1.9e-46|30.6|258/300|PfkB| RP:SCP:NREP 1 RP:SCP:REP 2->308|1gqtA|5e-29|17.9|290/305|c.72.1.1| HM:SCP:REP 1->301|1dgmA_|1.8e-55|31.4|296/0|c.72.1.1|1/1|Ribokinase-like| OP:NHOMO 190 OP:NHOMOORG 187 OP:PATTERN 111-1---------------------------1121111111111111-1111-111--1-11----- ----1---------11111-111111111111111111111111----------------111--121111----1------------1111-1------------------------------------------11121---11-----------------------------------------------1----------------1--------------------11--------------------------------------------------------------------------------------------------------11-----------------------------------------------------------------------------------1----------------11------------------------------------------------------1----1111111111111111111111111111111111111111111111-11111111111-------111111-------11111111----------------1-------------------------11---------------------------------1-11------------------------------------------------------------------------------------------------------1-----------------------------------1------------------------------------1111111111----11------------------------------------------------------1-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-----------1----1---------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 322 STR:RPRED 100.0 SQ:SECSTR EEEEEEcccEEEEEEEccccccccccTTcccEEEcccccccEEEEEEcHHHHHHHHHHHTTcEEEEEcEEcTTTTHHHHHHHHTTcccTTcEEcccccccEEEEEEcccccEEccEEcGGGGGGGGcccccccEEEEEEccccHHHHHHHHHHHcTTcEEEEccGGGGGGccHHHHHHHHHHHHHHTccEEEEEHHHHHHHHHHHTccHHHHHTTccEEEEEcGGGcEEEEccccEEEEccccccccccccTTHHHHHHHHHHHHHHTTccHHHHHHHHHHHHHHHTTcccccTTcccHHHHHHHHHHcHcHHHHHHHHTTc PSIPRED cEEEEEEcccccEEEEEccccccEEcHHHccccccEEEcccEEEEcccHHHHHHHHHHHccccEEEEEEEEccHHHHHHHHHHccccccEEEEccccccEEEEEEEcccccEEEEEEcccccccccccHHHHcccccccEEEEEcccHHHHHHHHHHHHHcccEEEEccccccccccHHHHHHHHccccEEEEcHHHHHHHcccccccHHHHHccccEEEEEEcccEEEEEEccccEEEEcccccccccccccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHccccccHHccccc //