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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56559.1
DDBJ      :             putative sugar kinase
Swiss-Prot:             

Homologs  Archaea  22/68 : Bacteria  559/915 : Eukaryota  45/199 : Viruses  0/175   --->[See Alignment]
c.55.1
:333 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   8->66 2oceA PDBj 2e-05 34.5 %
:BLT:PDB   60->317 1z05A PDBj 4e-25 28.1 %
:RPS:PDB   9->315 2aa4A PDBj 6e-37 27.0 %
:RPS:SCOP  9->320 1sz2A1  c.55.1.7 * 1e-29 14.5 %
:HMM:SCOP  6->322 1sz2A1 c.55.1.7 * 1e-61 39.5 %
:RPS:PFM   10->188 PF00480 * ROK 2e-26 43.6 %
:HMM:PFM   10->188 PF00480 * ROK 2.2e-55 43.6 179/179  
:BLT:SWISS 7->315 GLK_STRLI 3e-70 45.6 %
:PROS 134->161|PS01125|ROK
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56559.1 GT:GENE BAD56559.1 GT:PRODUCT putative sugar kinase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(1864469..1865470) GB:FROM 1864469 GB:TO 1865470 GB:DIRECTION - GB:PRODUCT putative sugar kinase GB:PROTEIN_ID BAD56559.1 LENGTH 333 SQ:AASEQ MTAAAPLTVGIDVGGTNIRASVVDAAGEVLDTVQAPTPHSARALEDALDRAVRELCARHRIAAVGLAVAGFVDEHRAAVRFAPHLPWRDAPVARQLTERLGLPVILEHDANAAAWAEYRFGAAAGGHNVVLVAIGTGIGAALLVGGALYRGTHGVAPELGHLQVVPNGRACPCGKRGCWERYCSGTALADTAIELLATDPSESTVLAREVFSDPGALTGRRVAGAAQDGDPVALAAVADFGRWLGLGLAFVSDIFDPDLIVVAGGVSSSAPLFLDDAREEYARAVTGAGHRPLARIRTTQLGEAAGMIGAAELARAVLSEPAAPPSRRVGTGR GT:EXON 1|1-333:0| BL:SWS:NREP 1 BL:SWS:REP 7->315|GLK_STRLI|3e-70|45.6|309/317| PROS 134->161|PS01125|ROK|PDOC00866| TM:NTM 2 TM:REGION 127->149| TM:REGION 249->271| SEG 129->148|vvlvaigtgigaallvggal| BL:PDB:NREP 2 BL:PDB:REP 8->66|2oceA|2e-05|34.5|58/729| BL:PDB:REP 60->317|1z05A|4e-25|28.1|249/396| RP:PDB:NREP 1 RP:PDB:REP 9->315|2aa4A|6e-37|27.0|281/289| RP:PFM:NREP 1 RP:PFM:REP 10->188|PF00480|2e-26|43.6|179/181|ROK| HM:PFM:NREP 1 HM:PFM:REP 10->188|PF00480|2.2e-55|43.6|179/179|ROK| RP:SCP:NREP 1 RP:SCP:REP 9->320|1sz2A1|1e-29|14.5|296/319|c.55.1.7| HM:SCP:REP 6->322|1sz2A1|1e-61|39.5|296/0|c.55.1.7|1/1|Actin-like ATPase domain| OP:NHOMO 1285 OP:NHOMOORG 626 OP:PATTERN --1-1-----------111111--11111-1--------------111-------------111--11 245-C111111111-1111-12---411111-211114662123577173227461-6112574575CB7511114442-112-1111224215-1---11----11314--------------111112112122-2244111421111111--1111111111112221-1-----1----221--441312111111321121112463322111234-52144433256111111111111111111113-112211--13222322111112241111111211222222222222222222222221211111211221-271111111213321113333121-222-111--11511265521212122--------1------------11111111111-11111111231-611532156534----111-1111-111111111121111-------------------------------------------------1-----------------------------------21----1111-------------------1---------11212111111113--3-------------------------11333-1----1211111--1111-------1-------------44434324444444444-4444444444444444443463332224444444444444444433433432-422222212222-------------1----111121-11111112-----------1-----------------2--111---122225455422222----------------111111111---11----------------------1-------1331122223-12 --------------------------------------------------------------------------------------------------------------3111121111--11321113B1-114--11111111-11-111111111-----------------------------------11-1- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 321 STR:RPRED 96.4 SQ:SECSTR ####ccEEEEEEEcccEEEEEEEcTTccEEEEEEEEccccHHHHHHHHHHHHTTTGGGccEEEEEEEEccEEETTEEEcccGGGGGGTTccHHHHHHHHHcccEEEEEHHHHHHHHHHHTccTTccccEEEEEEcccEEEEEEETTEEEccTTcccccGGGccccTTccccTTcccccHHHHHcHHHHHHTccGGGTTcccccTTHHHHcTTTHcTccHHHHHHHHHTTcHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEHHHHTcTTHHHHHHHHHHTTcccHHHGGGccEEEEccccccHHHHHHHHHHHHHHccTTccc######## DISOP:02AL 1-2, 324-333| PSIPRED ccccccEEEEEEEcccEEEEEEEcccccEEEEEEEcccccHHHHHHHHHHHHHHHHHcccEEEEEEEcccEEEcccEEEEEccccccccccHHHHHHHHccccEEEEccHHHHHHHHHHHccccccccEEEEEEcccccEEEEEccEEEEccccccccccEEEEccccccccccccccHHHHHcHHHHHHHHHHHHcccccHHHHHHHHHccccccccHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEccHHHccHHHHHHHHHHHHHHHccHHHccccEEEEEEEcccHHHHHHHHHHHHHHHcccccHHHcccccc //