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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56562.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  42/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
d.129.3
:145 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   1->47 2rezA PDBj 7e-04 36.2 %
:RPS:PDB   7->145 2d4rC PDBj 4e-12 23.9 %
:RPS:SCOP  1->144 2rerA1  d.129.3.6 * 4e-15 21.5 %
:HMM:SCOP  1->146 1t17A_ d.129.3.6 * 2.4e-25 32.2 %
:RPS:PFM   11->121 PF03364 * Polyketide_cyc 2e-10 30.6 %
:HMM:PFM   11->139 PF03364 * Polyketide_cyc 8.3e-16 28.4 116/130  

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56562.1 GT:GENE BAD56562.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(1867263..1867700) GB:FROM 1867263 GB:TO 1867700 GB:DIRECTION - GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD56562.1 LENGTH 145 SQ:AASEQ MADRTQRSILIEAPAREVMAVIADLASYPEWVAAAKSVEVLETGTDGRARTARFVLDAGVVKDTYVLSYTWRPDDRAVSWKLVSGELQKAQDGSYVLAEKPGGVTEVTYELTVDLNIPMIGMFKRKAEKVITDTALKELKKRVEG GT:EXON 1|1-145:0| BL:PDB:NREP 1 BL:PDB:REP 1->47|2rezA|7e-04|36.2|47/155| RP:PDB:NREP 1 RP:PDB:REP 7->145|2d4rC|4e-12|23.9|134/143| RP:PFM:NREP 1 RP:PFM:REP 11->121|PF03364|2e-10|30.6|108/128|Polyketide_cyc| HM:PFM:NREP 1 HM:PFM:REP 11->139|PF03364|8.3e-16|28.4|116/130|Polyketide_cyc| RP:SCP:NREP 1 RP:SCP:REP 1->144|2rerA1|4e-15|21.5|144/155|d.129.3.6| HM:SCP:REP 1->146|1t17A_|2.4e-25|32.2|143/0|d.129.3.6|1/1|Bet v1-like| OP:NHOMO 97 OP:NHOMOORG 42 OP:PATTERN -------------------------------------------------------------------- ---11---------25533-34114233333345551233-211----------------111-111111------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------11------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 145 STR:RPRED 100.0 SQ:SECSTR ccEEEEEEEEEcccHHHHHHHHHcHHHHGGGcTTEEEEEEEEcEETTEEEEEEEEEETEEEETcEEEEEEEETTTTEEEEEEEEEEcccEEEEEEEEEEETTEcEEEEEEEEEEccccccTTTcHHHHHHHHHHHHHHHHHHHHH DISOP:02AL 1-2| PSIPRED ccEEEEEEEEEcccHHHHHHHHHHHHHHHHHccHHcEEEEEEEcccccEEEEEEEEEEccEEEEEEEEEEEEccccEEEEEEEEcccccEEEEEEEEEEEccccEEEEEEEEEEEccccHHHHHHHHHHHHHHHHHHHHHHHHcc //