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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56564.1
DDBJ      :             putative glycosyltransferase
Swiss-Prot:             

Homologs  Archaea  54/68 : Bacteria  669/915 : Eukaryota  53/199 : Viruses  0/175   --->[See Alignment]
c.87.1
:375 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   162->326 3c4qB PDBj 1e-19 41.8 %
:RPS:PDB   114->375 3d1jA PDBj 2e-30 16.3 %
:RPS:SCOP  5->375 2iv7A1  c.87.1.8 * 4e-32 17.3 %
:HMM:SCOP  1->375 2bisA1 c.87.1.8 * 3.2e-74 34.2 %
:RPS:PFM   192->344 PF00534 * Glycos_transf_1 6e-29 48.3 %
:HMM:PFM   186->356 PF00534 * Glycos_transf_1 6.3e-44 37.8 164/172  
:BLT:SWISS 139->338 WCAL_ECOLI 1e-17 31.9 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56564.1 GT:GENE BAD56564.1 GT:PRODUCT putative glycosyltransferase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(1868219..1869346) GB:FROM 1868219 GB:TO 1869346 GB:DIRECTION - GB:PRODUCT putative glycosyltransferase GB:PROTEIN_ID BAD56564.1 LENGTH 375 SQ:AASEQ MARTLLVTNDFPPRPGGIQSYLQALAGQVPSDELVVYAPRWRGDSHVKFDAEQKFRVVRHPTTLMLPTPAVLRRAARLVRAERCDTVWFGAAAPLALLAPGLRRAGAQRVLASTHGHEVGWSMLPVARQALRAIGETTDVVTYVSKYTRGRFAAAFGPNAALEYLPPGVDPEVFRPDPAARAELRARYGLGERPTILCLSRLVPRKGQDALIVAMREIRTRVDGAVLVIAGSGPYEQKLRALAQTLDLERDVVFTGRVPSAELAAHHTLADVFAMPSRTRGAGLDVEGLGIVYLEASATGVPVIAGRSGGAPETVREGETGRVVDGRRVTEIADAVTAILSDPDAAAAMGAAGRAWVRERWHWDTIGARLRHLLR GT:EXON 1|1-375:0| BL:SWS:NREP 1 BL:SWS:REP 139->338|WCAL_ECOLI|1e-17|31.9|191/406| SEG 70->81|avlrraarlvra| SEG 90->107|gaaaplallapglrraga| SEG 345->355|aaaamgaagra| BL:PDB:NREP 1 BL:PDB:REP 162->326|3c4qB|1e-19|41.8|153/393| RP:PDB:NREP 1 RP:PDB:REP 114->375|3d1jA|2e-30|16.3|252/475| RP:PFM:NREP 1 RP:PFM:REP 192->344|PF00534|6e-29|48.3|145/165|Glycos_transf_1| HM:PFM:NREP 1 HM:PFM:REP 186->356|PF00534|6.3e-44|37.8|164/172|Glycos_transf_1| GO:PFM:NREP 1 GO:PFM GO:0009058|"GO:biosynthetic process"|PF00534|IPR001296| RP:SCP:NREP 1 RP:SCP:REP 5->375|2iv7A1|4e-32|17.3|358/370|c.87.1.8| HM:SCP:REP 1->375|2bisA1|3.2e-74|34.2|363/0|c.87.1.8|1/1|UDP-Glycosyltransferase/glycogen phosphorylase| OP:NHOMO 1895 OP:NHOMOORG 776 OP:PATTERN 22----12333323314111-3-173343423145113112-254-E531478-3513253---1-4- 4263553433543457733-3644223333324676868747778-52333113212122442255357442111111----2111---13--2-------221-24261---------------22242333241CFFKO233O4C55F45211333231414436DFC514211113-111253--24122222222222222222225443323424411-1111111691111-1111111111-111-11121121112231111111-11111111111111111111111111111111111111111111111111--121111111-1-11223211113--5--34336451523431321--7431111-----222321-111-1411111111111--1234145232-255134344353232--2322133212--------44423234------------111111111111-----13243-132352221233111122532222-11495313--12-31--1--121-212431212-11--11224877-5533555464445-1-311272232435647-11-----------------1---165---422213-1-------1------11------4445------111-221133111111--3112112112312111112-----2222-12121222122221-11-222-1-----------------11111-11131321---1---1111----111-111--2221121212-11112-211-11-11111-1--111111-211111111111112222--2-221111-------12---------------------------33-3-2241215- --11--1--------11------11-1--1111-----------111-11111111-1-----1------1---------1------1----1---111-1-2----1--1----------------------------------------------------1---------1-2211----1-5496-43221---2 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 373 STR:RPRED 99.5 SQ:SECSTR ##EEEEEcTTccTTcccHHHHHHHHHHHHHHTEEEEEEEcccGGGccEEEEETTEEEEEEcccccccccGGGGGGGHHHHHHTccccEEEEEHHHHHHHHHHHHHHHTccEEEHHHHHTTcTTTcTTcHHHHHHHHHHTcEEEccccccHTTTccTTTcTTccccccTTcGGGHHHHHHHHHHHHTccccccccEEEEEccccTTTTHHHHHHHHHHHHHTTcEEEEEEcccHHHHHHHHHHHHHcTTTTTEEEEEcccHHHHHHHHHHccEEEEccccTccTTTccccccHHHHHHHHTcEEEEEccHHHHHHcccccHHHEEccccHHHHHHHHHHHHHHHTcHHHHHHHHHHHHHccccHHHHHHHHHHHHc PSIPRED ccEEEEEcccccccccHHHHHHHHHHHHHHHcccEEEEEEccccccccccccccEEEEEcccccccccHHHHHHHHHHHHHHcccEEEEEccHHHHHHHHHHHHHccccEEEEEccccccHHHHHHHHHHHHHHHHHccEEEEccHHHHHHHHHHccccccEEEEcccccHHHcccccccHHHHHHHcccccccEEEEEEEccHHccHHHHHHHHHHHHHHcccEEEEEEcccHHHHHHHHHHHHccccccEEEEEcccHHHHHHHHHHccEEEEcccccccccccccccHHHHHHHHccccEEEccccccHHHHcccccEEEEccccHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHc //