[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56565.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  27/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
:326 amino acids
:PSIPRED
:DISOPRED
:HMM:PFM   183->218 PF04450 * BSP 0.00011 37.1 35/205  
:HMM:PFM   220->254 PF00288 * GHMP_kinases_N 0.0009 35.3 34/68  
:HMM:PFM   165->199 PF09967 * DUF2201 0.00089 37.1 35/428  
:BLT:SWISS 150->203 HTPX_MOOTA 4e-04 35.2 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56565.1 GT:GENE BAD56565.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(1869415..1870395) GB:FROM 1869415 GB:TO 1870395 GB:DIRECTION - GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD56565.1 LENGTH 326 SQ:AASEQ MNDWRRALSWCSARGRAHFLLTVLTVALLTGACCALVLLPRGAGADTARPVAGEVVGSRSTDPRVAEVERIMAPFGAVEVRTAAGGGLVLAHPGQAEAAATLAAELPAATAAVTDLWGPDWSREAVVVAAANPSEFAALLRAPDLLPAEVAAASVADPFRPGTRPTGQRVVFAPDAGTRLSPAELRTLLRHELTHVAARAQTVDGAPQWMLEGFAEYAAHRGLGSSFAAIAPTVLAAAQRGDLPADLPADAAFTGAGAVLAYEQAWTVSAFVADRYGEDRLVRLYRAVAAGRLDTAGEDRVLREVLGTDRTAFVARWREWVADRAR GT:EXON 1|1-326:0| BL:SWS:NREP 1 BL:SWS:REP 150->203|HTPX_MOOTA|4e-04|35.2|54/100| TM:NTM 1 TM:REGION 19->41| SEG 20->30|lltvltvallt| SEG 96->112|aeaaatlaaelpaataa| SEG 137->148|aallrapdllpa| SEG 242->252|dlpadlpadaa| HM:PFM:NREP 3 HM:PFM:REP 183->218|PF04450|0.00011|37.1|35/205|BSP| HM:PFM:REP 220->254|PF00288|0.0009|35.3|34/68|GHMP_kinases_N| HM:PFM:REP 165->199|PF09967|0.00089|37.1|35/428|DUF2201| OP:NHOMO 27 OP:NHOMOORG 27 OP:PATTERN -------------------------------------------------------------------- ----1---------11111-1---1111111--1111111----------------------1-1-1111----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-3, 325-326| PSIPRED ccHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHcccccccEEEEEcccccccEEEEcccccccHHcccccccEEEEEEcccEEEEEEccccHHHHHHHHcccHHHHHHHHHHcccccccEEEEEEccHHHHHHHHcccccccccEEEEEEcccccccccccccEEEEccccccccccHHHHHHHHHHHHHHHHHHHHcccccEEHHHHHHHHHHccccccHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHcccccHHHHHHHHHHHHcccHHHHHHHHHHHHHHHcc //