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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56582.1
DDBJ      :             putative membrane protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  54/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
:564 amino acids
:PSIPRED
:DISOPRED
:HMM:PFM   201->334 PF09594 * DUF2029 1e-05 29.8 121/241  
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56582.1 GT:GENE BAD56582.1 GT:PRODUCT putative membrane protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(1887459..1889153) GB:FROM 1887459 GB:TO 1889153 GB:DIRECTION - GB:PRODUCT putative membrane protein GB:PROTEIN_ID BAD56582.1 LENGTH 564 SQ:AASEQ MHPPETSAATSAETVTSGSTGTSGPGPGGLDARPGLRSRMQTYADFARSPEGHAALLGFLGALMITFGGFGAGSVRKRDPLLEALHLSWLRFGHGYALSTIVIWIGVLLMITAWVRLGRTTIGFGERPGHVTLNELRAIVGIWIFPLLFAVPMFSRDAYSYLAQGALLRDGFDPYQVGPVANPGVLLDNVSPVWTTTTAPYGPVFLLLGRAITAITGDNVVAGTIALRLVMLPGLALMMWAVPYLTKHLGGKPTVALWLAVLNPLVLIHLIGGVHNEMLMVGLMCAGIALVLERHHVAGIVVVAIGVAIKATAGVALPFLVWIWMLHERERRAAERAGRDLDATAGTADDAAKATPDMPHPVLTFAKIAGLGLSVFALVFVAASAIAGVGIGWLTALSGSKKIINWLSLPTVMAHATTWITPLRLESVLTVTRALCALALVVVLVATWWRFRHSEREAVFGILIAFVAIVILSPAALPWYYSWPLALAAGFALSTTTLMALVGVCTWLMLVFQPDGSIGLYNFWHVAAATFVAVVAALSLRQVDPLRLRANPPPAPSAARVSRA GT:EXON 1|1-564:0| TM:NTM 13 TM:REGION 52->73| TM:REGION 95->117| TM:REGION 133->155| TM:REGION 188->210| TM:REGION 222->244| TM:REGION 250->272| TM:REGION 274->296| TM:REGION 301->323| TM:REGION 368->390| TM:REGION 427->449| TM:REGION 457->479| TM:REGION 488->510| TM:REGION 524->546| SEG 3->29|ppetsaatsaetvtsgstgtsgpgpgg| SEG 52->63|ghaallgflgal| SEG 297->316|vagivvvaigvaikatagva| SEG 328->357|ererraaeragrdldatagtaddaakatpd| SEG 370->392|glglsvfalvfvaasaiagvgig| SEG 428->447|vltvtralcalalvvvlvat| SEG 526->537|vaaatfvavvaa| SEG 545->563|plrlranpppapsaarvsr| HM:PFM:NREP 1 HM:PFM:REP 201->334|PF09594|1e-05|29.8|121/241|DUF2029| OP:NHOMO 101 OP:NHOMOORG 54 OP:PATTERN -------------------------------------------------------------------- ---1-22222222222222-22222222222222222222--1----1-11-221222--31223221-1----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-30, 554-564| PSIPRED cccccccccccHHHcccccccccccccccccccHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHccHHHcccccHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHcccccccccccccHHHccccccccccHHHHHHHHccHHHHHHHHHHHHHHHHcccHHHHHHHccHHHHHHHHHHHHHHHHEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEccccccccccccccc //