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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56587.1
DDBJ      :             putative monooxygenase
Swiss-Prot:             

Homologs  Archaea  10/68 : Bacteria  414/915 : Eukaryota  2/199 : Viruses  0/175   --->[See Alignment]
c.1.16
:394 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   19->107 1f07A PDBj 3e-07 29.4 %
:RPS:PDB   5->355 1brlA PDBj 2e-26 16.0 %
:RPS:SCOP  5->355 1brlB  c.1.16.1 * 9e-26 12.9 %
:HMM:SCOP  3->373 1lucA_ c.1.16.1 * 2.1e-65 41.4 %
:RPS:PFM   17->110 PF00296 * Bac_luciferase 1e-11 47.9 %
:HMM:PFM   17->120 PF00296 * Bac_luciferase 9.5e-28 39.4 104/307  
:HMM:PFM   177->346 PF00296 * Bac_luciferase 1.8e-16 23.5 166/307  
:BLT:SWISS 5->360 YVBT_BACSU 3e-45 38.2 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56587.1 GT:GENE BAD56587.1 GT:PRODUCT putative monooxygenase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(1893423..1894607) GB:FROM 1893423 GB:TO 1894607 GB:DIRECTION - GB:PRODUCT putative monooxygenase GB:PROTEIN_ID BAD56587.1 LENGTH 394 SQ:AASEQ MSVPLSVLDLAPVSAGSSPRQALRNTVELARKAEEWGYHRYWLAEHHFVAVASASPITLIALVAAATSRIRVGSGAVQLGHHTSASIVEGFGTVDALHPGRLDLGIGRSGHRRAQFGAEAGAPKGAHPVDDAATGRTTVRDGVVVPPPFDPRGLGDRRRYLAGLAALHLPGAEPLDFAEQVAEIRALLDGTYVTADGVPLHAVPGEGARVQLWVFGSSGGESAELAGRLGLPFAAAYHTAPGTALEAVAAYRAAFRPSVQLAEPYVVVSADVVVAEDDAAARHLASTYGHWVHSIRAGGGAAEILDPDTAAPLTPDQRRLVEDRLATQFVGSPATVVERLGALQRATGANELLVTSVTYDHAARLASHRLLAEAWGLLPAARDGHARTGAAVTP GT:EXON 1|1-394:0| BL:SWS:NREP 1 BL:SWS:REP 5->360|YVBT_BACSU|3e-45|38.2|306/336| SEG 143->148|vvvppp| SEG 161->175|laglaalhlpgaepl| SEG 216->227|gssggesaelag| SEG 266->281|vvvsadvvvaeddaaa| SEG 361->374|haarlashrllaea| BL:PDB:NREP 1 BL:PDB:REP 19->107|1f07A|3e-07|29.4|85/321| RP:PDB:NREP 1 RP:PDB:REP 5->355|1brlA|2e-26|16.0|300/340| RP:PFM:NREP 1 RP:PFM:REP 17->110|PF00296|1e-11|47.9|94/296|Bac_luciferase| HM:PFM:NREP 2 HM:PFM:REP 17->120|PF00296|9.5e-28|39.4|104/307|Bac_luciferase| HM:PFM:REP 177->346|PF00296|1.8e-16|23.5|166/307|Bac_luciferase| RP:SCP:NREP 1 RP:SCP:REP 5->355|1brlB|9e-26|12.9|294/319|c.1.16.1| HM:SCP:REP 3->373|1lucA_|2.1e-65|41.4|319/0|c.1.16.1|1/1|Bacterial luciferase-like| OP:NHOMO 651 OP:NHOMOORG 426 OP:PATTERN ----------1-11----------1111-121------------------------------------ 1-1-2213223111222----2--22-----111114335-8162131222-454112----21222322------------1----------------1-1-1-112-1----------------------------------1----------------------111-------------111-----1-411111111-111111313335111-11232111111-13222222222222222321341-------------------------1111-----------------1111111111111-------------------------------------11---------------------1--3111------1521--12111122222222223-11111111311-6445322213112211---32222111--------111----1------------------------------1121-221-22333321222122223333122251212-11111111111112-11--1-11------------111---------------------------21---1-------------------1---1111-11--1111-1111-1-1111----1---------------1233-221111111111-111111111111111111133323---111-1111111111-141111111--111111111111--------------1-12111--1---------11111-11111111111111122211111------------------------2211111111--------11-----------------------------------1---------------1- -------------1------------------------------------------------------------------------------------------------------------------------------------------------1---------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 346 STR:RPRED 87.8 SQ:SECSTR #TTcEEEEEcccccTTccHHHHHHHHHHHHHHHHHTTcccEEEEcccccTcccccHHHHHHHHHHTcccccEEEEEEEcTTccHHHHHHHHHHHHHHHTccEEEEEEccccHHHHHHHHHTTcccTTHHHHHHHHHHHHHHHcHHTccHHHHTccccTHHE#############HHHHHHHHHHHHHHcccccccccEEcccccccTTcccEEEEcccHHHHHHHHHHTTccEEEcccccHHHHHHHHHHHHHHHHHTccTTTcccEEEEEcEEcccHHHHHHHHHHHHHHHHHHHHHHHTccccccccccccccccccccTTGGGGccEEcHHHHHHHHHHHHHHHcccEEEEEcccTT################################## DISOP:02AL 388-394| PSIPRED cccccEEEEEEcccccccHHHHHHHHHHHHHHHHHccccEEEEEEccccccccccHHHHHHHHHHHcccEEEEEEEEEcccccHHHHHHHHHHHHHHccccEEEEEEcccccHHHHHccccccccHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHcccccccccccEEEEEcccccccEEEEEEcccHHHHHHHHHccccEEEEEEccHHHHHHHHHHHHHHHHccccccccEEEEEEcEEEcccHHHHHHHHHHHHHHHHHHHHcccccccccHHHHccccHHHHHHHHHccccEEEccHHHHHHHHHHHHHHHcccEEEEEcccccHHHHHHHHHHHHHHHccccccccccccccccccc //